RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 POP5Q969H6 163 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 COL21A1Q96P44 957 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ASPNQ9BXN1 380 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 ZNF334Q9HCZ1 680 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 MPP6Q9NZW5 540 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SLAMF8Q9P0V8 285 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 EVLQ9UI08 416 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 SAMD4AQ9UPU9 718 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 HSPE1-MOB4S4R3N1 261 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 FXYD1O00168 92 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 UGT2B17O75795 530 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ABLIM3O94929 683 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 MLYCDO95822 493 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 DHFRP00374 187 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 CBLP22681 906 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 DAOAP59103 153 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SH3BP2P78314 561 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SLC35A2P78381 396 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 RPA4Q13156 261 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 FNDC3BQ53EP0 1204 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 CLEC20AQ6ZU45 233 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SPNS2Q8IVW8 549 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 TAGAPQ8N103 731 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 TESCQ96BS2 214 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PCED1BQ96HM7 432 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 HBEGFQ99075 208 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 IL1RAPQ9NPH3 570 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SLC35C2Q9NQQ7 365 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ACOXLQ9NUZ1 547 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ZNF490Q9ULM2 529 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 CHURC1-FNTBB4DL54 471 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PRR23D1E9PI22 279 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 NUPL2O15504 423 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 RPP40O75818 363 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 SERPINF2P08697 491 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PIRTP0C851 137 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PRR23D2P0DMB1 279 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 F8A1P23610 371 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 EVI2BP34910 448 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 LIPAP38571 399 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 FNTBP49356 437 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 GPR15P49685 360 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PWP1Q13610 501 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 ZNF235Q14590 738 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 NCF4Q15080 339 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 POU4F3Q15319 338 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 DDI2Q5TDH0 399 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 GPRIN3Q6ZVF9 776 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 TMEM132CQ8N3T6 1108 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 HMGCLL1Q8TB92 370 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 RIT1Q92963 219 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 MBOAT4Q96T53 435 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 NUSAP1Q9BXS6 441 aaKnown RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 HDHD5Q9BXW7 423 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 FAM126AQ9BYI3 521 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 SPRTNQ9H040 489 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 ZIM2Q9NZV7 527 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 MARCH2Q9P0N8 246 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 SPASTQ9UBP0 616 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 POLR3HQ9Y535 204 aaPredicted RBP8.39□□□□□ -1.07
DDB1-217ENST00000540166 FRMPD3Q5JV73 1810 aa8.39□□□□□ -1.07
DDB1-217ENST00000540166 PRAMEF33A0A0G2JMD5 474 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 H0YC42 278 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 AKR7A2O43488 359 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 PRAMEF10O60809 474 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 DIRAS1O95057 198 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 SLC2A3P11169 496 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 GGT1P19440 569 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 GGT5P36269 586 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 AIF1P55008 147 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 RHAGQ02094 409 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 FGFBP1Q14512 234 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 UNC50Q53HI1 259 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 OR2T5Q6IEZ7 315 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 TSPYL5Q86VY4 417 aaPredicted RBP8.38□□□□□ -1.07
DDB1-217ENST00000540166 PJA1Q8NG27 643 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 OR2T29Q8NH02 315 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 SPPL2AQ8TCT8 520 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 SPON2Q9BUD6 331 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 GSTO2Q9H4Y5 243 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 SLC32A1Q9H598 525 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 NIPAL2Q9H841 368 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 ERVMER34-1Q9H9K5 563 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 MALT1Q9UDY8 824 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 A0A096LPI6 279 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 TCRBV5S2A0A599 114 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 E9PAM4 449 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 TSPAN3O60637 253 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 MRPS14O60783 128 aaKnown RBP8.38□□□□□ -1.07
DDB1-217ENST00000540166 SBK3P0C264 359 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 SLC2A2P11168 524 aaPredicted RBP8.38□□□□□ -1.07
DDB1-217ENST00000540166 ADH5P11766 374 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 GLULP15104 373 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 PCMT1P22061 227 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 C21orf33P30042 268 aaPredicted RBP8.38□□□□□ -1.07
DDB1-217ENST00000540166 CTHP32929 405 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 MAP2K3P46734 347 aa8.38□□□□□ -1.07
DDB1-217ENST00000540166 RENBPP51606 427 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms