RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 GALNT18Q6P9A2 607 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 TRPM8Q7Z2W7 1104 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 COMMD6Q7Z4G1 85 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 ARHGAP22Q7Z5H3 698 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 UBE3DQ7Z6J8 389 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 METTL4Q8N3J2 472 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 CSNK1A1LQ8N752 337 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 KCT2Q8NC54 265 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 CCDC74BQ96LY2 380 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 SORBS1Q9BX66 1292 aaKnown RBP10.89□□□□□ -0.67
FAM60A-206ENST00000539409 BRINP2Q9C0B6 783 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 LHX9Q9NQ69 397 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 GPR45Q9Y5Y3 372 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 RIF1Q5UIP0 2472 aaKnown RBP10.89□□□□□ -0.67
FAM60A-206ENST00000539409 GVINP1Q7Z2Y8 2422 aa10.89□□□□□ -0.67
FAM60A-206ENST00000539409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 BCKDHAP12694 445 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ACPPP15309 386 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ARL4DP49703 201 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 PDX1P52945 283 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SNRPNP63162 240 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SPIDRQ14159 915 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 NOXRED1Q6NXP6 359 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 FOXR1Q6PIV2 292 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 CPSF7Q8N684 471 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 CAMKVQ8NCB2 501 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 RCBTB1Q8NDN9 531 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 OR2L5Q8NG80 312 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 WDR48Q8TAF3 677 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ZNF285Q96NJ3 590 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 C17orf62Q9BQA9 187 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 CENPKQ9BS16 269 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 EBPLQ9BY08 206 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SDR39U1Q9NRG7 319 aaPredicted RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SIRT5Q9NXA8 310 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 PLCL2Q9UPR0 1127 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 RUVBL1Q9Y265 456 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 RTCAO00442 366 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 MAP3K7O43318 606 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ERI3O43414 337 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SRPX2O60687 465 aaPredicted RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 EIF2S1P05198 315 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 MSL3P1P0C860 447 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 G6PDP11413 515 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SDC1P18827 310 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 TIA1P31483 386 aaKnown RBP eCLIP10.88□□□□□ -0.677e-6■■■□□ 17.4
FAM60A-206ENST00000539409 BSGP35613 385 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ATP4BP51164 291 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 RAP1GDS1P52306 607 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 PLA2G16P53816 162 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 STXBP1P61764 594 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SQLEQ14534 574 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 GSTA3Q16772 222 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 B3GNT8Q7Z7M8 397 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 ARHGEF39Q8N4T4 335 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 RGMAQ96B86 450 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 SLC45A3Q96JT2 553 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 CCDC106Q9BWC9 280 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 TOR4AQ9NXH8 423 aa10.88□□□□□ -0.67
FAM60A-206ENST00000539409 EIF3LQ9Y262 564 aaKnown RBP10.88□□□□□ -0.67
FAM60A-206ENST00000539409 CAPN14A8MX76 684 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 PCDH7O60245 1069 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 FOLR1P15328 257 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 TACR1P25103 407 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 MRPL19P49406 292 aaKnown RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 LIMK1P53667 647 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ILKQ13418 452 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 PTGR1Q14914 329 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 GPR19Q15760 415 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 PRTGQ2VWP7 1150 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 WASHC2DQ5SRD0 308 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 FAM91A1Q658Y4 838 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ABHD17CQ6PCB6 329 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 CYP20A1Q6UW02 462 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 LIX1Q8N485 282 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ZNF655Q8N720 491 aaPredicted RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 GAL3ST3Q96A11 431 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 KCNC2Q96PR1 638 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 TEFMQ96QE5 360 aaKnown RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 STARD5Q9NSY2 213 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 AHSPQ9NZD4 102 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 A0A0G2JN53 185 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 H3BMH7 237 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ANKRD28O15084 1053 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 EEDO75530 441 aaKnown RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 RFPL3O75679 317 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 GBAP04062 536 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ZNF888P0CJ79 500 aaPredicted RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 CD1EP15812 388 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 GPX3P22352 226 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 MAPK1P28482 360 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ARFIP1P53367 373 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 RAB8AP61006 207 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 STX1BP61266 288 aa10.87□□□□□ -0.67
FAM60A-206ENST00000539409 ZFP36L1Q07352 338 aaKnown RBP10.87□□□□□ -0.67
FAM60A-206ENST00000539409 PDCD4Q53EL6 469 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms