RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ASRGL1Q7L266 308 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 SNX32Q86XE0 403 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLN6-202ENST00000538696 KRT78Q8N1N4 520 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 GALNT15Q8N3T1 639 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 RNF175Q8N4F7 328 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 ANKRD53Q8N9V6 530 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 MFSD9Q8NBP5 474 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 WDR20Q8TBZ3 569 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 SLC45A3Q96JT2 553 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 PPP3R2Q96LZ3 170 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 OR2A5Q96R48 311 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 LRMDAQ9H2I8 198 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 NT5DC2Q9H857 520 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 AIG1Q9NVV5 245 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 KNTC1P50748 2209 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 LOC105369274A0A096LPK9 316 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 LOC102723532A0A0G2JNH3 316 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 H0YIV9 168 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 PSMD12O00232 456 aaPredicted RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 MAP3K7O43318 606 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 OR1F1O43749 312 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 MSL3P1P0C860 447 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 CCL4P13236 92 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 GPX3P22352 226 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 CXCR2P25025 360 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 ID4P47928 161 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 DIO3P55073 304 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 NME5P56597 212 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 STX1BP61266 288 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 RPS15AP62244 130 aaKnown RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 RPL38P63173 70 aaKnown RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 ACY1Q03154 408 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 DDX39BQ13838 428 aaKnown RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 RBBP5Q15291 538 aaKnown RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 AP5B1Q2VPB7 878 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 PAOXQ6QHF9 649 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 RAB11FIP2Q7L804 512 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 VN1R4Q7Z5H5 301 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 MCATQ8IVS2 390 aaKnown RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 HOMEZQ8IX15 550 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 OR4N4Q8N0Y3 316 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 FNDC5Q8NAU1 212 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 FBXO27Q8NI29 283 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 KLHL29Q96CT2 875 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 ZNF501Q96CX3 271 aaPredicted RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 CMKLR1Q99788 373 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 PITHD1Q9GZP4 211 aaPredicted RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 PLCL2Q9UPR0 1127 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 POLR3HQ9Y535 204 aaPredicted RBP16.43■□□□□ 0.22
CLN6-202ENST00000538696 GPR45Q9Y5Y3 372 aa16.43■□□□□ 0.22
CLN6-202ENST00000538696 LOC100653049A0A140TA62 436 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 SERTM1A2A2V5 107 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 TMEM150CB9EJG8 249 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 H0YGG7 62 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
CLN6-202ENST00000538696 KRT34O76011 436 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 STATHP02808 62 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 PCNAP12004 261 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 PTPN4P29074 926 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 ETV5P41161 510 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 ARF3P61204 181 aaPredicted RBP16.42■□□□□ 0.22
CLN6-202ENST00000538696 CYP4F2P78329 520 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 EMX2Q04743 252 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 GSTA3Q16772 222 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 AGKQ53H12 422 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 MED27Q6P2C8 311 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 VN1R5Q7Z5H4 357 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 ZFAND4Q86XD8 727 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 LAS2Q8IYD9 372 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 TBC1D19Q8N5T2 526 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 OR1L3Q8NH93 324 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 CMTM5Q96DZ9 223 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 THAP11Q96EK4 314 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 ZNF285Q96NJ3 590 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 OR6C1Q96RD1 312 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 FGF21Q9NSA1 209 aa16.42■□□□□ 0.22
CLN6-202ENST00000538696 AKAP7Q9P0M2 348 aaPredicted RBP16.42■□□□□ 0.22
CLN6-202ENST00000538696 FER1L5A0AVI2 2057 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 B2RBV5 119 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 B4E171 279 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 H3BMH7 237 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 P2RX6O15547 441 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 RSL1D1O76021 490 aaKnown RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 IDO1P14902 403 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 ITIH1P19827 911 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 AHRP35869 848 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 TSPAN7P41732 249 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 MRPL19P49406 292 aaKnown RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 VSX2P58304 361 aaPredicted RBP16.41■□□□□ 0.22
CLN6-202ENST00000538696 KCNJ2P63252 427 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 MC2RQ01718 297 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 FOXM1Q08050 763 aa16.41■□□□□ 0.22
CLN6-202ENST00000538696 FOXC1Q12948 553 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms