RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ISG20Q96AZ6 181 aaKnown RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NACC2Q96BF6 587 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KLHL29Q96CT2 875 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ECHDC3Q96DC8 303 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TRIM44Q96DX7 344 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OXNAD1Q96HP4 312 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PDLIM2Q96JY6 352 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CABS1Q96KC9 395 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TSGA13Q96PP4 275 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LENG8Q96PV6 779 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PSKH2Q96QS6 385 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TRIB3Q96RU7 358 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 WDR24Q96S15 920 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 IL12RB2Q99665 862 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MESP1Q9BRJ9 268 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CCDC106Q9BWC9 280 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ACTRT3Q9BYD9 372 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KRTAP9-3Q9BYQ3 159 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KLHL4Q9C0H6 718 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ABCG8Q9H221 673 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 STN1Q9H668 368 aaKnown RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MRPL47Q9HD33 250 aaKnown RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TM9SF3Q9HD45 589 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 POLE3Q9NRF9 147 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SIRT3Q9NTG7 399 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ETAA1Q9NY74 926 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SMARCAL1Q9NZC9 954 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 VSX1Q9NZR4 365 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 VPS18Q9P253 973 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LRIT1Q9P2V4 623 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NKX1-2Q9UD57 310 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TBK1Q9UHD2 729 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 STEAP1Q9UHE8 339 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PYCARDQ9ULZ3 195 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LIPT1Q9Y234 373 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 UBE2J1Q9Y385 318 aaPredicted RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 POMT1Q9Y6A1 747 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 U3KQA8 63 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RALGAPA1Q6GYQ0 2036 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CENPEQ02224 2701 aa2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
TNFRSF1A-210ENST00000537842 UTP20O75691 2785 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TDRD6O60522 2096 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ARHGEF17Q96PE2 2063 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 UNC13CQ8NB66 2214 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ADGRG4Q8IZF6 3080 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PCDH15Q96QU1 1955 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ADAMTS9Q9P2N4 1935 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TENM4Q6N022 2769 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 hCG_1818297A0A087WSY0 165 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CXorf51AA0A1B0GTR3 108 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 A0A1W2PNU3 283 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TRBC2A0A5B9 178 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TSPAN11A1L157 253 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MACROD2A1Z1Q3 448 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A18PA6NE21 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A16PA6NEW6 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 NPIPB15A6NHN6 443 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TMEM200CA6NKL6 621 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MARCH11A6NNE9 402 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A9PA6NNJ1 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A5PA8MXJ8 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TLR4O00206 839 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KPNA3O00505 521 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC30A4O14863 429 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PCDH17O14917 1159 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RRP9O43818 475 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 KIF1CO43896 1103 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PEX1O43933 1283 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HS6ST1O60243 411 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CST8O60676 142 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZNF217O75362 1048 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GCATO75600 419 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 RNF8O76064 485 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 POP4O95707 220 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 MT-CYBP00156 380 aaPredicted RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 GSRP00390 522 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SOD1P00441 154 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 TPM3P06753 285 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SERPINF2P08697 491 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ALPIP09923 528 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A15PP0C7V4 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 FAM90A14PP0C7W9 464 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PIRTP0C851 137 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ZSCAN5DPP0CG00 497 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HKR1P10072 659 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SPTBP11277 2137 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ADRB3P13945 408 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CCNB1P14635 433 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ETS1P14921 441 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CTPS1P17812 591 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 ENGP17813 658 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PTPN3P26045 913 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CD27P26842 260 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 OXTRP30559 389 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 CXCR5P32302 372 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 HNF1BP35680 557 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SSR1P43307 286 aaKnown RBP2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 SLC15A1P46059 708 aa2.49□□□□□ -2.01
TNFRSF1A-210ENST00000537842 AVPR1BP47901 424 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms