RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 BEND4Q6ZU67 534 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 MYLIPQ8WY64 445 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 MAGIXQ9H6Y5 334 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 NT5DC2Q9H857 520 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 SMPD4Q9NXE4 827 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 COA4Q9NYJ1 87 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 PCOLCE2Q9UKZ9 415 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 PCDHGA9Q9Y5G4 932 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 C2orf74A8MZ97 194 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 CBX4O00257 560 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 LTA4HP09960 611 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 GSTM5P46439 218 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 UGT3A2Q3SY77 523 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 GPR33Q49SQ1 333 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TSTD2Q5T7W7 516 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 C17orf107Q6ZR85 190 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 DET1Q7L5Y6 550 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 RAB11FIP2Q7L804 512 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TFAP2BQ92481 460 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 OTUB1Q96FW1 271 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 ZC3HAV1LQ96H79 300 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 RHNO1Q9BSD3 238 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 GORASP2Q9H8Y8 452 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TINAGQ9UJW2 476 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TRAV19A0A0A6YYK7 116 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 GRXCR1A8MXD5 290 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 CLDN10P78369 228 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 LIMS2Q7Z4I7 341 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 PSTKQ8IV42 348 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 PPM1MQ96MI6 270 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 KCTD15Q96SI1 283 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 ZBTB18Q99592 522 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF251Q9BRH9 671 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEM175Q9BSA9 504 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 RBCK1Q9BYM8 510 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 REV1Q9UBZ9 1251 aa10.51□□□□□ -0.73
CLSTN3-207ENST00000537408 FAM234BA2RU67 622 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 MMP20O60882 483 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 FHP07954 510 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 POU2F1P14859 743 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PGDP52209 483 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PRKG2Q13237 762 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF460Q14592 562 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF79Q15937 498 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ETFDHQ16134 617 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PAGE3Q5JUK9 113 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 C9orf50Q5SZB4 431 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ANKRD34AQ69YU3 496 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SLC39A4Q6P5W5 647 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 JAZF1Q86VZ6 243 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ACVR1CQ8NER5 493 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 BTN2A2Q8WVV5 523 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CREB3L1Q96BA8 519 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CDCA3Q99618 268 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 NUSAP1Q9BXS6 441 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ANKRA2Q9H9E1 313 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 TMEFF2Q9UIK5 374 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ZCWPW2A0A1B0GU75 182 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 MDM4O15151 490 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 RASGRP1O95267 797 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PAMP19021 973 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 S100PP25815 95 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SDC2P34741 201 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 BMP8BP34820 402 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SULT1E1P49888 294 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 HNMTP50135 292 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 MTPNP58546 118 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 RPL6Q02878 288 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 RCAN2Q14206 197 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 KANK2Q63ZY3 851 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 KRT78Q8N1N4 520 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CSGALNACT1Q8TDX6 532 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 MS4A7Q9GZW8 240 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 POLE3Q9NRF9 147 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 MIOSQ9NXC5 875 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 TJP2Q9UDY2 1190 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PIPSLA2A3N6 862 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PCDH17O14917 1159 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 NBNO60934 754 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 TSPAN8P19075 237 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 RPS7P62081 194 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 DEFA5Q01523 94 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 POU4F1Q01851 419 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 DSC1Q08554 894 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 GRB7Q14451 532 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CCDC157Q569K6 752 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 GPR158Q5T848 1215 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 C5orf46Q6UWT4 87 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 KIAA1191Q96A73 305 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SENP8Q96LD8 212 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 TRIM62Q9BVG3 475 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PSORS1C1Q9UIG5 152 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SSR3Q9UNL2 185 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 A0A096LPI6 279 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 GLYATL1P3A0A0U1RQE8 302 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 A0A1B0GVI7 797 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ELOVL7A1L3X0 281 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms