RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 BRF2Q9HAW0 419 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 RAD18Q9NS91 495 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 CORO2BQ9UQ03 480 aa12.59□□□□□ -0.39
LGR5-202ENST00000536515 EXO1Q9UQ84 846 aaKnown RBP12.59□□□□□ -0.39
LGR5-202ENST00000536515 LTBP2Q14767 1821 aa12.58□□□□□ -0.39
LGR5-202ENST00000536515 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 DPM1O60762 260 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 PPIBP23284 216 aaKnown RBP12.58□□□□□ -0.4
LGR5-202ENST00000536515 GADD45AP24522 165 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 PBLDP30039 288 aaPredicted RBP12.58□□□□□ -0.4
LGR5-202ENST00000536515 CDH12P55289 794 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 ELP6Q0PNE2 266 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TIGD6Q17RP2 521 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 POM121L1PQ3SYA9 428 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 LMNTD1Q8N9Z9 388 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 MINDY2Q8NBR6 621 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 ATL1Q8WXF7 558 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 COQ8BQ96D53 544 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 GIN1Q9NXP7 522 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 M0R129 80 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TIMP1P01033 207 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 CATP04040 527 aaKnown RBP12.58□□□□□ -0.4
LGR5-202ENST00000536515 ALOX5P09917 674 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 HSD3B1P14060 373 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 HSD3B2P26439 372 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 PDHA2P29803 388 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 CD40LGP29965 261 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TIA1P31483 386 aaKnown RBP eCLIP12.58□□□□□ -0.41e-10■■■■■ 30
LGR5-202ENST00000536515 VIPR1P32241 457 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 CSNK2BP67870 215 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 HBA1P69905 142 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 SPIBQ01892 262 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TEAD4Q15561 434 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TMPRSS11BQ86T26 416 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 DNAJC22Q8N4W6 341 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 RASGEF1AQ8N9B8 481 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 GGHQ92820 318 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 NEIL2Q969S2 332 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 NIPSNAP1Q9BPW8 284 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 SACM1LQ9NTJ5 587 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 ZNF282Q9UDV7 671 aaPredicted RBP12.58□□□□□ -0.4
LGR5-202ENST00000536515 ACSL6Q9UKU0 697 aa12.58□□□□□ -0.4
LGR5-202ENST00000536515 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 SAP18O00422 153 aaKnown RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 ADAMDEC1O15204 470 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 AQP9O43315 295 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 AP2A2O94973 939 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 DBTP11182 482 aaKnown RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 PABPC1P11940 636 aaKnown RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 ZNF30P17039 623 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 FUT4P22083 530 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 CTSKP43235 329 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 MAGEA8P43361 318 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 PPP5CP53041 499 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 MVDP53602 400 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 SPIN4Q56A73 249 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 COLEC12Q5KU26 742 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 CAMKMTQ7Z624 323 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 LGI4Q8N135 537 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 UTP15Q8TED0 518 aaKnown RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 FCGR1BQ92637 280 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 TRIM43Q96BQ3 446 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 C6orf62Q9GZU0 229 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 PRAMEF25A6NGN4 478 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 TGM5O43548 720 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 KDM1AO60341 852 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 LEFTY1O75610 366 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 C6orf47O95873 294 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 LRG1P02750 347 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 CDK1P06493 297 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 STSP08842 583 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 CTSAP10619 480 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 ZNF8P17098 575 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 GRK5P34947 590 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 EIF2DP41214 584 aaKnown RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 RECQLP46063 649 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 MC1RQ01726 317 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 SLC13A2Q13183 592 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 TBCEQ15813 527 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 EXOC3L2Q2M3D2 409 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 AGAP7PQ5VUJ5 663 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 NCCRP1Q6ZVX7 275 aaPredicted RBP12.57□□□□□ -0.4
LGR5-202ENST00000536515 OR56A3Q8NH54 315 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 NFKBIDQ8NI38 313 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 SORCS1Q8WY21 1168 aa12.57□□□□□ -0.4
LGR5-202ENST00000536515 HPS1Q92902 700 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms