RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PHC2Q8IXK0 858 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 CCAR2Q8N163 923 aaKnown RBP4.07□□□□□ -1.76
PRKDC-205ENST00000535375 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.07□□□□□ -1.76
PRKDC-205ENST00000535375 KIF18AQ8NI77 898 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.07□□□□□ -1.76
PRKDC-205ENST00000535375 AP1M1Q9BXS5 423 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 FAM129AQ9BZQ8 928 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 C10orf88Q9H8K7 445 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 C3orf14Q9HBI5 128 aa4.07□□□□□ -1.76
PRKDC-205ENST00000535375 PHPT1Q9NRX4 125 aaPredicted RBP4.07□□□□□ -1.76
PRKDC-205ENST00000535375 IGLV3-10A0A075B6K4 115 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 TRAV18A0A075B6X5 111 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 IGHV3-38A0A0C4DH36 116 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 E5RGE8 158 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 BCL2L11O43521 198 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 PRAF2O60831 178 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 HPP00738 406 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ADORA3P0DMS8 318 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 TCF4P15884 667 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 RAD23AP54725 363 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ZNF273Q14593 569 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 UPP1Q16831 310 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ZNF542PQ5EBM4 170 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 C1orf141Q5JVX7 400 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ARMC3Q5W041 872 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 DHRS11Q6UWP2 260 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 Q6ZR54 194 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 SPATA21Q7Z572 469 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ABI3BPQ7Z7G0 1075 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ANKRD23Q86SG2 305 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 PHLDB2Q86SQ0 1253 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 OR5M9Q8NGP3 310 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 RADILQ96JH8 1075 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ZMAT2Q96NC0 199 aaKnown RBP4.06□□□□□ -1.76
PRKDC-205ENST00000535375 OR10A4Q9H209 315 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 ST6GALNAC4Q9H4F1 302 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 IARS2Q9NSE4 1012 aaKnown RBP4.06□□□□□ -1.76
PRKDC-205ENST00000535375 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 NSG2Q9Y328 171 aa4.06□□□□□ -1.76
PRKDC-205ENST00000535375 NEDD4P46934 1319 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 GLTPD2A6NH11 291 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ANXA2P2A6NMY6 339 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 H3BMM5 538 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 CCDC188H7C350 402 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 KIF5CO60282 957 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 PGLSO95336 258 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 C9P02748 559 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 FOLR2P14207 255 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 GP9P14770 177 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 GLULP15104 373 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 EDNRAP25101 427 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 CDX1P47902 265 aaPredicted RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ROR1Q01973 937 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 TNK1Q13470 666 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 CCDC184Q52MB2 194 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 SPOUT1Q5T280 376 aaKnown RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 TIPARPQ7Z3E1 657 aaKnown RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 DNAJB7Q7Z6W7 309 aaPredicted RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 MARCH9Q86YJ5 346 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 APCDD1Q8J025 514 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ZPLD1Q8TCW7 415 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ALKBH7Q9BT30 221 aaPredicted RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ADNPQ9H2P0 1102 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 ZCCHC17Q9NP64 241 aaKnown RBP4.05□□□□□ -1.76
PRKDC-205ENST00000535375 TMOD3Q9NYL9 352 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 NCKAP1Q9Y2A7 1128 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 STYXL1Q9Y6J8 313 aa4.05□□□□□ -1.76
PRKDC-205ENST00000535375 SRRM5B3KS81 715 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 RNF103O00237 685 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 INPP4BO15327 924 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 GPRIN2O60269 458 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 PDGFRAP16234 1089 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 GOT1P17174 413 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 PTAFRP25105 342 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 CTNNA2P26232 953 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 ATP4BP51164 291 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
PRKDC-205ENST00000535375 SRPXP78539 464 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 GCKRQ14397 625 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 TAZQ16635 292 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 ZRANB3Q5FWF4 1079 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 SEL1L3Q68CR1 1132 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 FBXL16Q8N461 479 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 RAD54LQ92698 747 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 FER1L6-AS2Q96M78 137 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 RAB3IPQ96QF0 476 aaPredicted RBP4.04□□□□□ -1.76
PRKDC-205ENST00000535375 FERMT1Q9BQL6 677 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 PAPOLGQ9BWT3 736 aaKnown RBP4.04□□□□□ -1.76
PRKDC-205ENST00000535375 SH3GLB2Q9NR46 395 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 ANAPC5Q9UJX4 755 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 SPATA31D1Q6ZQQ2 1576 aa4.04□□□□□ -1.76
PRKDC-205ENST00000535375 MYH14Q7Z406 1995 aaKnown RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 TRIM49BA6NDI0 452 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 NPIPA3F8WFD2 350 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 FLRT2O43155 660 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 LRCH4O75427 683 aa4.03□□□□□ -1.76
PRKDC-205ENST00000535375 MOCS2O96007 188 aaPredicted RBP4.03□□□□□ -1.76
PRKDC-205ENST00000535375 MT-ND2P03891 347 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms