RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 Q8N9G6 341 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 HIPK4Q8NE63 616 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TNIP2Q8NFZ5 429 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 OR4K1Q8NGD4 311 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SLC5A11Q8WWX8 675 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 NEIL2Q969S2 332 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 AHCYL2Q96HN2 611 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ABCG4Q9H172 646 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 LRRN3Q9H3W5 708 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF385DQ9H6B1 395 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 EFCAB1Q9HAE3 211 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PELI2Q9HAT8 420 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 EML4Q9HC35 981 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SEMA4BQ9NPR2 832 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 RAPGEFL1Q9UHV5 662 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 RAP2CQ9Y3L5 183 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 GSAPA4D1B5 854 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 H3BNH8 94 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PPP6CO00743 305 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 UBFD1O14562 309 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 HDAC3O15379 428 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PRAMEF4O60810 478 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ESRRBO95718 433 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 C9P02748 559 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 EBLN1P0CF75 366 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 C1GALT1C1LP0DN25 315 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PORP16435 677 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PSMB5P28074 263 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 MRPS22P82650 360 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 CFHR1Q03591 330 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TRAP1Q12931 704 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PRAMEF9Q5VWM5 478 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 NKAIN2Q5VXU1 208 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 LIPJQ5W064 366 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ATG9BQ674R7 924 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 NXPE4Q6UWF7 544 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ATG14Q6ZNE5 492 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 HOMEZQ8IX15 550 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 OR52B6Q8NGF0 335 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 WDR48Q8TAF3 677 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF420Q8TAQ5 688 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ADAMTS16Q8TE57 1224 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ZDHHC12Q96GR4 267 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 EFHD1Q9BUP0 239 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ILKAPQ9H0C8 392 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 MRPS30Q9NP92 439 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TMEM184CQ9NVA4 438 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SEMA5BQ9P283 1151 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ANKMY1Q9P2S6 941 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SNX7Q9UNH6 387 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SH2B3Q9UQQ2 575 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 MN1Q10571 1320 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 IGKV1-8A0A0C4DH67 115 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 A0A0J9YY10 115 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 A0A1W2PQM1 296 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 E7EQ34 232 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 NTN3O00634 580 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ACOT8O14734 319 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CAPN5O15484 640 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CPNE6O95741 557 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CHRNGP07510 517 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 FGF4P08620 206 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF26P17031 533 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 TSPAN8P19075 237 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CCR10P46092 362 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 YBX1P67809 324 aaKnown RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 SH3BP2P78314 561 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CCL7P80098 99 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 IRF8Q02556 426 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 RELAQ04206 551 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CHIT1Q13231 466 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 DOC2AQ14183 400 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 MAPRE2Q15555 327 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 AMZ1Q400G9 498 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 GGTA1PQ4G0N0 100 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 KIAA1614Q5VZ46 1190 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF425Q6IV72 752 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 GPRIN3Q6ZVF9 776 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 SNX32Q86XE0 403 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 FAM129CQ86XR2 697 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CHCHD4Q8N4Q1 142 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 NETO1Q8TDF5 533 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 BORCS5Q969J3 196 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ABTB1Q969K4 478 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ATP6V1E2Q96A05 226 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ZUFSPQ96AP4 578 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ASB9Q96DX5 294 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 RMND5BQ96G75 393 aaPredicted RBP11.78□□□□□ -0.52
SCARB1-204ENST00000535005 CDRT15Q96T59 188 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 EFCAB11Q9BUY7 163 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 ANKRD60Q9BZ19 345 aa11.78□□□□□ -0.52
SCARB1-204ENST00000535005 PITHD1Q9GZP4 211 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms