RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 Q6ZVU0 165 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ADAMTSL2Q86TH1 951 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SLC44A2Q8IWA5 706 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 CLDN19Q8N6F1 224 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TRPV3Q8NET8 790 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 FAM162AQ96A26 154 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TMCO6Q96DC7 493 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 UBXN10Q96LJ8 280 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 FOPNLQ96NB1 174 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 NSUN5Q96P11 429 aaKnown RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 WACQ9BTA9 647 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 GTPBP2Q9BX10 602 aaKnown RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 FAM83DQ9H4H8 585 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 RANBP3Q9H6Z4 567 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 CHURC1-FNTBB4DL54 471 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 PRRT4C9JH25 899 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 NIPSNAP2O75323 286 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 PDE9AO76083 593 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 CRHBPP24387 322 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF81P51508 661 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ARHGDIBP52566 201 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 POLR2GP62487 172 aaKnown RBP eCLIP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 FAPQ12884 760 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 DAG1Q14118 895 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 IER5LQ5T953 404 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 PRMT9Q6P2P2 845 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 BTN2A1Q7KYR7 527 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 PACRGLQ8N7B6 248 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 RDH11Q8TC12 318 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SGTBQ96EQ0 304 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TMEM74Q96NL1 305 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 CDCP1Q9H5V8 836 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 RNF167Q9H6Y7 350 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 MRM3Q9HC36 420 aaKnown RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SARDHQ9UL12 918 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 FAM50BQ9Y247 325 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ASCC3Q8N3C0 2202 aaKnown RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 LINC01387J3KSC0 135 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 BCKDKO14874 412 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 RGS10O43665 173 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SLITRK5O94991 958 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SIX3O95343 332 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TSPAN12O95859 305 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 IL1BP01584 269 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SERPINF2P08697 491 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 MTHFD2P13995 350 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TYRP14679 529 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 IMPDH1P20839 514 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 KCNK10P57789 538 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 EMX1Q04741 257 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 C19orf57Q0VDD7 668 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ZXDCQ2QGD7 858 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF648Q5T619 568 aaPredicted RBP8.72□□□□□ -1.01
SF3B2-216ENST00000534765 SCIMPQ6UWF3 145 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 LNX2Q8N448 690 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 NUDT8Q8WV74 236 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 LRCH3Q96II8 777 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 ST6GAL2Q96JF0 529 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 DYRK4Q9NR20 520 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TDP1Q9NUW8 608 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 COPZ2Q9P299 210 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 TMEM181Q9P2C4 612 aa8.72□□□□□ -1.01
SF3B2-216ENST00000534765 POM121CA8CG34 1229 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 CD3EAPO15446 510 aaKnown RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 FCARP24071 287 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 SSTR4P31391 388 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 NUP62P37198 522 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 HK3P52790 923 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ARSFP54793 590 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 FOXA1P55317 472 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ZSWIM7Q19AV6 140 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 RBM48Q5RL73 367 aaKnown RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ANKRD34AQ69YU3 496 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 TBPL2Q6SJ96 375 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ISCA2Q86U28 154 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 UBQLNLQ8IYU4 475 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ADGRG5Q8IZF4 528 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 MRPS31Q92665 395 aaKnown RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 HTATIP2Q9BUP3 242 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 THUMPD3Q9BV44 507 aaKnown RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF416Q9BWM5 594 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 TINAGL1Q9GZM7 467 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 MFSD1Q9H3U5 465 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 POMKQ9H5K3 350 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 CHMP1AQ9HD42 196 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 CCM2LQ9NUG4 571 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-216ENST00000534765 ENOPH1Q9UHY7 261 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 CD84Q9UIB8 345 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 GMPPBQ9Y5P6 360 aa8.71□□□□□ -1.01
SF3B2-216ENST00000534765 NUMA1Q14980 2115 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 A0A0J9YYE9 177 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SH3D21A4FU49 640 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 SLC1A7O00341 560 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 GP2P55259 537 aaKnown RBP8.71□□□□□ -1.02
SF3B2-216ENST00000534765 RAB10P61026 200 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 UGT8Q16880 541 aa8.71□□□□□ -1.02
SF3B2-216ENST00000534765 FAM98BQ52LJ0 330 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms