RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 SLC6A16Q9GZN6 736 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 AICDAQ9GZX7 198 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 KCNE2Q9Y6J6 123 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 SCN2AQ99250 2005 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 IGHV3-20A0A0C4DH32 117 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 ZNF860A6NHJ4 632 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 C4orf51C9J302 202 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 TAPBPO15533 448 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 SEMA7AO75326 666 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 B3GALT4O96024 378 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 CCDC166P0CW27 439 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 ITGAMP11215 1152 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 CD1DP15813 335 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 POU3F2P20265 443 aaPredicted RBP13.25□□□□□ -0.29
SF3B2-215ENST00000534307 GGT5P36269 586 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 MAGEA4P43358 317 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 SLC12A2P55011 1212 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 RHAGQ02094 409 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 TLR1Q15399 786 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 OR4D1Q15615 310 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 DEFB134Q4QY38 66 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 CDKL4Q5MAI5 379 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 PLAG1Q6DJT9 500 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 SLCO4C1Q6ZQN7 724 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 FRA10AC1Q70Z53 315 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 CPEB2Q7Z5Q1 589 aaKnown RBP13.25□□□□□ -0.29
SF3B2-215ENST00000534307 ANKRD37Q7Z713 158 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 TBC1D19Q8N5T2 526 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 CATSPER1Q8NEC5 780 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 UTP15Q8TED0 518 aaKnown RBP13.25□□□□□ -0.29
SF3B2-215ENST00000534307 METTL21AQ8WXB1 218 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 HAS2Q92819 552 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 PEX11GQ96HA9 241 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 EGFL8Q99944 293 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 AIF1LQ9BQI0 150 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 TMEM79Q9BSE2 394 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
SF3B2-215ENST00000534307 ZDHHC18Q9NUE0 388 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 PTGFRNQ9P2B2 879 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 TXNDC16Q9P2K2 825 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 DYRK1BQ9Y463 629 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 COPG1Q9Y678 874 aaKnown RBP13.25□□□□□ -0.29
SF3B2-215ENST00000534307 NF1P21359 2839 aa13.25□□□□□ -0.29
SF3B2-215ENST00000534307 POLEQ07864 2286 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 ESYT3A0FGR9 886 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 FAM155BO75949 473 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 SEC24DO94855 1032 aaPredicted RBP13.24□□□□□ -0.29
SF3B2-215ENST00000534307 WDR47O94967 919 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 SERPINA6P08185 405 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 ZNF888P0CJ79 500 aaPredicted RBP13.24□□□□□ -0.29
SF3B2-215ENST00000534307 C1GALT1C1LP0DN25 315 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 ICAM2P13598 275 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 STMN1P16949 149 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 GNAZP19086 355 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 COL8A1P27658 744 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 GLRBP48167 497 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 AGTR2P50052 363 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 RAB10P61026 200 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 ATP6V0D1P61421 351 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 AP2B1P63010 937 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 RGS1Q08116 209 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 NR6A1Q15406 480 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 TICAM1Q8IUC6 712 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 PLPP5Q8NEB5 264 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 RNF32Q9H0A6 362 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 MAP10Q9P2G4 905 aa13.24□□□□□ -0.29
SF3B2-215ENST00000534307 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
SF3B2-215ENST00000534307 NCF1BA6NI72 391 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 NCF1CA8MVU1 366 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 MAGEB17A8MXT2 336 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 E2F3O00716 465 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CHST10O43529 356 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CDC123O75794 336 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TBX6O95947 436 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 FHP07954 510 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 SLC35E2BP0CK96 405 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 NCF1P14598 390 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 STX2P32856 288 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 SPRP35270 261 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 GMPRP36959 345 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 DCTP40126 519 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 KCNC1P48547 511 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 TNFSF10P50591 281 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 OLR1P78380 273 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 SLC7A5Q01650 507 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CKAP4Q07065 602 aaKnown RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 CDC16Q13042 620 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 NAB1Q13506 487 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 ABRAXAS2Q15018 415 aa13.23□□□□□ -0.29
SF3B2-215ENST00000534307 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
SF3B2-215ENST00000534307 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms