RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 NDUFS4O43181 175 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 DPM1O60762 260 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 KLHL18O94889 574 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 S100BP04271 92 aaPredicted RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 SNRPAP09012 282 aaKnown RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 COX6A1P12074 109 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 ICAM2P13598 275 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 SERPINB1P30740 379 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 HSPA7P48741 367 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 AGTR2P50052 363 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 PGDP52209 483 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 EFNA3P52797 238 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 STXBP1P61764 594 aaKnown RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 AP2B1P63010 937 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 MEF2AQ02078 507 aaPredicted RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 BMPR2Q13873 1038 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 RBBP7Q16576 425 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 PAGE2BQ5JRK9 111 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 LIPJQ5W064 366 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 KLC3Q6P597 504 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 RIPOR1Q6ZS17 1223 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 PLD6Q8N2A8 252 aaKnown RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 TMEM151AQ8N4L1 468 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 METTL27Q8N6F8 245 aaPredicted RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 UBE2E3Q969T4 207 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 IMMP1LQ96LU5 166 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 TSNARE1Q96NA8 513 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 LMF1Q96S06 567 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 C1QTNF3Q9BXJ4 246 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 AICDAQ9GZX7 198 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 ZNF700Q9H0M5 742 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 ZNF71Q9NQZ8 489 aaPredicted RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 LANCL2Q9NS86 450 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 PPT2Q9UMR5 302 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 NAALAD2Q9Y3Q0 740 aa9.3□□□□□ -0.92
NUP98-220ENST00000533346 HEMK1Q9Y5R4 338 aaPredicted RBP9.3□□□□□ -0.92
NUP98-220ENST00000533346 SYNDIG1LA6NDD5 238 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 NCF1BA6NI72 391 aaPredicted RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 NCF1CA8MVU1 366 aaPredicted RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 MAGEB17A8MXT2 336 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 UBXN8O00124 270 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 ALOX12BO75342 701 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 SORBS2O94875 1100 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 FAM153BP0C7A2 387 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 RHOXF2BP0C7M4 288 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 NCF1P14598 390 aaPredicted RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 ACPPP15309 386 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 EPB42P16452 691 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 IL1RNP18510 177 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 CD22P20273 847 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 GMPRP36959 345 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 HNF4AP41235 474 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 TSFMP43897 325 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 PIK3CGP48736 1102 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 CD97P48960 835 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 FOXL2P58012 376 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 IRF9Q00978 393 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 RHAGQ02094 409 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 CHAF1BQ13112 559 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 DOC2AQ14183 400 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 SLBPQ14493 270 aaKnown RBP eCLIP9.29□□□□□ -0.92
NUP98-220ENST00000533346 SLC29A2Q14542 456 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 HIST2H2ACQ16777 129 aaPredicted RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 SYT16Q17RD7 645 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 FAM153CQ494X1 144 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 HIST2H2AA3Q6FI13 130 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 JMJD6Q6NYC1 403 aaPredicted RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 QSOX2Q6ZRP7 698 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 PRSS41Q7RTY9 318 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 VN1R5Q7Z5H4 357 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 TDRPQ86YL5 185 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.29□□□□□ -0.92
NUP98-220ENST00000533346 SRFBP1Q8NEF9 429 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 C7orf57Q8NEG2 295 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 OR2L5Q8NG80 312 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 ACMSDQ8TDX5 336 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 MZB1Q8WU39 189 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 ESAMQ96AP7 390 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 MS4A6EQ96DS6 147 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 QRFPRQ96P65 431 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 MACROD1Q9BQ69 325 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 MRPL57Q9BQC6 102 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 RHOXF2Q9BQY4 288 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 TUBB6Q9BUF5 446 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 NTMT1Q9BV86 223 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 UNKQ9C0B0 810 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 LHPPQ9H008 270 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 RIC8BQ9NVN3 520 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 OPTCQ9UBM4 332 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 ASB1Q9Y576 335 aa9.29□□□□□ -0.92
NUP98-220ENST00000533346 TLN1Q9Y490 2541 aaKnown RBP9.29□□□□□ -0.92
NUP98-220ENST00000533346 BOD1L1Q8NFC6 3051 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 NSG1A0A0A6YYJ2 146 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 IQANK1A0A1B0GTG1 560 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 EXOC1LA0A1B0GW35 172 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ANKDD1BA6NHY2 528 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 SUPT3HB4E1H0 165 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms