RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 APBB3O95704 486 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ETS2P15036 469 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 FUT4P22083 530 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 BMP8BP34820 402 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 SCRN3Q0VDG4 424 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 BMP8AQ7Z5Y6 402 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 TRAM1L1Q8N609 369 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 WASF2Q9Y6W5 498 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 DUX1O43812 170 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 CBX3Q13185 183 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 MOCOSQ96EN8 888 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 OR1A2Q9Y585 309 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 MYH7P12883 1935 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 IGKV6-21A0A0C4DH24 114 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CYP17A1P05093 508 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CHRM5P08912 532 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CASP6P55212 293 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CHERPQ8IWX8 916 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 RBP7Q96R05 134 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 SEC61A2Q9H9S3 476 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 GIN1Q9NXP7 522 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 POFUT2Q9Y2G5 429 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 BTN3A3O00478 584 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 SDC3O75056 442 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 TXNL4AP83876 142 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 FBXO43Q4G163 708 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 SATL1Q86VE3 508 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM17Q86X19 198 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 UBE2J2Q8N2K1 259 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 C2CD4AQ8NCU7 369 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 ACOT12Q8WYK0 555 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 OR8D2Q9GZM6 311 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 LINC00597Q9H2U6 94 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 H0YJX3 145 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 RPLP0P05388 317 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 WDR4P57081 412 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 VSX2P58304 361 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 ACSBG2Q5FVE4 666 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CEACAM20Q6UY09 585 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 IL22RA1Q8N6P7 574 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 GLYATL1Q969I3 302 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 LRRC58Q96CX6 371 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 POLR2J2Q9GZM3 115 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 MVB12BQ9H7P6 319 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 POMPQ9Y244 141 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 A0A1W2PQU0 124 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 MAFKO60675 156 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 ABATP80404 500 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 RUNX3Q13761 415 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 RAB43Q86YS6 212 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PLD6Q8N2A8 252 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 DHRS1Q96LJ7 313 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM5Q9Y2B1 443 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 H7BY64 318 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 EDN1P05305 212 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 TM4SF4P48230 202 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 SMSP52788 366 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 CLEC12AQ5QGZ9 265 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 DNAJA4Q8WW22 397 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM234Q8WY98 164 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PRAP1Q96NZ9 151 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 FIZ1Q96SL8 496 aa14.29□□□□□ -0.12
PCDHA9-202ENST00000532602 PRSS51A0A1B0GVH4 220 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FHP07954 510 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 GSTM4Q03013 218 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 HSF2Q03933 536 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ARFRP1Q13795 201 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 PON3Q15166 354 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ANKRA2Q9H9E1 313 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 PCDHB16Q9NRJ7 776 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 FKBP7Q9Y680 259 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 OR6C74A6NCV1 312 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 MID1O15344 667 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC16A5O15375 505 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 NOS1APO75052 506 aaPredicted RBP14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 ARSAP15289 507 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 NFKBIDQ8NI38 313 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 DOK4Q8TEW6 326 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 C15orf40Q8WUR7 153 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 NKD1Q969G9 470 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 TGM7Q96PF1 710 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CD244Q9BZW8 370 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 CD320Q9NPF0 282 aa14.28□□□□□ -0.12
PCDHA9-202ENST00000532602 MEMO1Q9Y316 297 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms