RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KRT78Q8N1N4 520 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 PLPP5Q8NEB5 264 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 OR5T3Q8NGG3 340 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 UTP15Q8TED0 518 aaKnown RBP16.26■□□□□ 0.19
PHRF1-204ENST00000532550 KIAA1191Q96A73 305 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 TBC1D20Q96BZ9 403 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 UBXN10Q96LJ8 280 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 IMMP1LQ96LU5 166 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 CLK4Q9HAZ1 481 aaKnown RBP16.26■□□□□ 0.19
PHRF1-204ENST00000532550 AGPAT4Q9NRZ5 378 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 GPRC5BQ9NZH0 403 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 PCDHGA10Q9Y5H3 936 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 CSAG2Q9Y5P2 127 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 HECTD1Q9ULT8 2610 aa16.26■□□□□ 0.19
PHRF1-204ENST00000532550 LRRK2Q5S007 2527 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 IGHV3-20A0A0C4DH32 117 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 TAPBPO15533 448 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 CHST10O43529 356 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 STK16O75716 305 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 SEC24DO94855 1032 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-204ENST00000532550 FHP07954 510 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 RAB8AP61006 207 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 ZNF169Q14929 603 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-204ENST00000532550 OR4D1Q15615 310 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 NSDHLQ15738 373 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 FHL5Q5TD97 284 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 CEP128Q6ZU80 1094 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 LANCL3Q6ZV70 420 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 ANKRD37Q7Z713 158 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 TBC1D1Q86TI0 1168 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-204ENST00000532550 MNS1Q8NEH6 495 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 TTLQ8NG68 377 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 STAG3L4Q8TBR4 150 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 SLC6A16Q9GZN6 736 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 NMRAL1Q9HBL8 299 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 ZDHHC18Q9NUE0 388 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 DNAJC11Q9NVH1 559 aa16.25■□□□□ 0.19
PHRF1-204ENST00000532550 MTRF1LQ9UGC7 380 aaKnown RBP16.25■□□□□ 0.19
PHRF1-204ENST00000532550 PTPN13Q12923 2485 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CLEC18AA5D8T8 446 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 B4GALT2O60909 372 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 DNAJB6O75190 326 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CDC123O75794 336 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 B3GALT4O96024 378 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 TUBB4AP04350 444 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CELA2AP08217 269 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 ITGAMP11215 1152 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 JAK1P23458 1154 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 PHBP35232 272 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 SOX11P35716 441 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 TSFMP43897 325 aaKnown RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 HSPA7P48741 367 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 STXBP1P61764 594 aaKnown RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 OLR1P78380 273 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 SRSF1Q07955 248 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■■■□ 20.8
PHRF1-204ENST00000532550 SLBPQ14493 270 aaKnown RBP eCLIP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 ABRAXAS2Q15018 415 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 EIF2S3LQ2VIR3 472 aaKnown RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 BTBD16Q32M84 506 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 TOR1AIP1Q5JTV8 583 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 B3GNTL1Q67FW5 361 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CLEC18BQ6UXF7 455 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CMC1Q7Z7K0 106 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 MMGT1Q8N4V1 131 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 SNX31Q8N9S9 440 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CLEC18CQ8NCF0 446 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CATSPER1Q8NEC5 780 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 OR1N1Q8NGS0 311 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CREB3L4Q8TEY5 395 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CCT6BQ92526 530 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 HAS2Q92819 552 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 ESAMQ96AP7 390 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 MRRFQ96E11 262 aaKnown RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 FAR2Q96K12 515 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 TMEM79Q9BSE2 394 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 RBCK1Q9BYM8 510 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 PITHD1Q9GZP4 211 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 KLHL31Q9H511 634 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 NT5DC2Q9H857 520 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 LANCL2Q9NS86 450 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 PLA2G3Q9NZ20 509 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 STMN3Q9NZ72 180 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 TEKT2Q9UIF3 430 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 PTBP2Q9UKA9 531 aaKnown RBP16.24■□□□□ 0.19
PHRF1-204ENST00000532550 ACOT9Q9Y305 439 aa16.24■□□□□ 0.19
PHRF1-204ENST00000532550 CTAGE15A4D2H0 777 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 ANKDD1BA6NHY2 528 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 A8MUI8 341 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 MAGEB17A8MXT2 336 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 SLC35E2BP0CK96 405 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 SMIM10L1P0DMW3 83 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 GSTM2P28161 218 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 RHAGQ02094 409 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 HYAL2Q12891 473 aa16.23■□□□□ 0.19
PHRF1-204ENST00000532550 MRPL49Q13405 166 aaKnown RBP16.23■□□□□ 0.19
PHRF1-204ENST00000532550 ELOAQ14241 798 aaKnown RBP16.23■□□□□ 0.19
PHRF1-204ENST00000532550 EFTUD2Q15029 972 aaKnown RBP eCLIP16.23■□□□□ 0.193e-7■■■■■ 37.6
PHRF1-204ENST00000532550 NR6A1Q15406 480 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms