RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 RHAGQ02094 409 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 PLGLB1Q02325 96 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 HSPA14Q0VDF9 509 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 NDUFA9Q16795 377 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 CCSMST1Q4G0I0 132 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 FILIP1LQ4L180 1135 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 FBXO42Q6P3S6 717 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 RANBP10Q6VN20 620 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 LINC00114Q6XXX2 140 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 PID1Q7Z2X4 250 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 MDGA2Q7Z553 956 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 PCGF5Q86SE9 256 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 RAB42Q8N4Z0 105 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 NAXEQ8NCW5 288 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 OR51Q1Q8NH59 317 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 LINC01560Q8TB33 94 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 RERGQ96A58 199 aaPredicted RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 OR2A5Q96R48 311 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 ACAT2Q9BWD1 397 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 MAK16Q9BXY0 300 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 TTTY12Q9BZ98 90 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 MRPS30Q9NP92 439 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 TRMT1Q9NXH9 659 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 AIPL1Q9NZN9 384 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 SPATA7Q9P0W8 599 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 SAE1Q9UBE0 346 aaPredicted RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 MTRF1LQ9UGC7 380 aaKnown RBP7.65□□□□□ -1.18
CD44-232ENST00000531118 PCYOX1Q9UHG3 505 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 ADGRE2Q9UHX3 823 aa7.65□□□□□ -1.18
CD44-232ENST00000531118 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.19
CD44-232ENST00000531118 A0A1B0GVC2 190 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 OR51F1A6NGY5 319 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 SAGE2PA6NJ88 616 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 HSPB2A8KAH6 182 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 TXNDC9O14530 226 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 HAT1O14929 419 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 SLC16A5O15375 505 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 OR1I1O60431 355 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 RDH16O75452 317 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 CDC123O75794 336 aaPredicted RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 SIX3O95343 332 aaPredicted RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 CNOT4O95628 575 aaKnown RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 TUBB4AP04350 444 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 EZRP15311 586 aaKnown RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 PSMB4P28070 264 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 FOXN2P32314 431 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 UBE2HP62256 183 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 ACTN3Q08043 901 aaPredicted RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 TMED2Q15363 201 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 HSPB2Q16082 182 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 KRTAP24-1Q3LI83 254 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 ZNF425Q6IV72 752 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 SEM1Q6ZVN7 128 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 TRILQ7L0X0 811 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 ULK2Q8IYT8 1036 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 ARMC10Q8N2F6 343 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 FAM109AQ8N4B1 249 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 PSD4Q8NDX1 1056 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 OR2M7Q8NG81 312 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 PIGTQ969N2 578 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 RAD51AP1Q96B01 352 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 CCL19Q99731 98 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 TBL1YQ9BQ87 522 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 LANCL2Q9NS86 450 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 NLE1Q9NVX2 485 aaPredicted RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 CTTNBP2NLQ9P2B4 639 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 RUVBL2Q9Y230 463 aaKnown RBP7.64□□□□□ -1.19
CD44-232ENST00000531118 NFS1Q9Y697 457 aa7.64□□□□□ -1.19
CD44-232ENST00000531118 MBD3L4A6NDZ8 208 aaPredicted RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 MBD3L5A6NJ08 208 aaPredicted RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 MAGEB17A8MXT2 336 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 J3QW42 95 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 SGK494L7N484 410 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 CLDN4O14493 209 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 GLSO94925 669 aaPredicted RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 C1orf105O95561 183 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 CELA3AP09093 270 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 GABRA1P14867 456 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 ENDOUP21128 410 aaKnown RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 MSNP26038 577 aaKnown RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 BCL6P41182 706 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 MAGEA5P43359 124 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 NR2C2P49116 596 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 MAN2A2P49641 1150 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 NSDHLQ15738 373 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 CCDC38Q502W7 563 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 WLSQ5T9L3 541 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 ITPRIPL1Q6GPH6 555 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 HEPHL1Q6MZM0 1159 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 TTC23LQ6PF05 361 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 RGS9BPQ6ZS82 235 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 BZW1Q7L1Q6 419 aaKnown RBP7.63□□□□□ -1.19
CD44-232ENST00000531118 SLC22A16Q86VW1 577 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 KIF18BQ86Y91 864 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 PLD3Q8IV08 490 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 TMEM156Q8N614 296 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 TMEM251Q8N6I4 163 aa7.63□□□□□ -1.19
CD44-232ENST00000531118 PLPP5Q8NEB5 264 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms