RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZDHHC6Q9H6R6 413 aa4.03□□□□□ -1.76
C11orf88-204ENST00000529661 PPANQ9NQ55 473 aaKnown RBP4.03□□□□□ -1.76
C11orf88-204ENST00000529661 INTS10Q9NVR2 710 aaKnown RBP4.03□□□□□ -1.76
C11orf88-204ENST00000529661 AKAP7Q9P0M2 348 aaPredicted RBP4.03□□□□□ -1.76
C11orf88-204ENST00000529661 ELF5Q9UKW6 265 aaPredicted RBP4.03□□□□□ -1.76
C11orf88-204ENST00000529661 ODF2LQ9ULJ1 636 aa4.03□□□□□ -1.76
C11orf88-204ENST00000529661 TEX264Q9Y6I9 313 aa4.03□□□□□ -1.76
C11orf88-204ENST00000529661 KIAA1217Q5T5P2 1943 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 FPGTO14772 594 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 BCAS2O75934 225 aaPredicted RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 EML2O95834 649 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 CLPTM1O96005 669 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 CD48P09326 243 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 RBMS1P29558 406 aaKnown RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 MAP2K2P36507 400 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 DNA2P51530 1060 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 CLCN4P51793 760 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 STARD6P59095 220 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 RPP38P78345 283 aaKnown RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 TEAD2Q15562 447 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 ARMCX4Q5H9R4 360 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF790Q6PG37 636 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 DHRS11Q6UWP2 260 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 SIGLEC15Q6ZMC9 328 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 APLFQ8IW19 511 aaPredicted RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 SERPINA12Q8IW75 414 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 TEX9Q8N6V9 391 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM99Q8N816 258 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 SLC37A3Q8NCC5 494 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 ADAD2Q8NCV1 583 aaKnown RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 OR2T11Q8NH01 316 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 CFAP36Q96G28 342 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 LRR1Q96L50 414 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 NACAP1Q9BZK3 213 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 TRIM7Q9C029 511 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 SLC39A8Q9C0K1 460 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 RPF1Q9H9Y2 349 aaKnown RBP4.02□□□□□ -1.77
C11orf88-204ENST00000529661 PANK4Q9NVE7 773 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 EPS15L1Q9UBC2 864 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 IL19Q9UHD0 177 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 PILRBQ9UKJ0 227 aa4.02□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM129A0AVI4 362 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 SLC9B1P1A6NJY1 282 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 TEX28O15482 410 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 KIF5CO60282 957 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 KHDRBS3O75525 346 aaKnown RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 AP2A2O94973 939 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF883P0CG24 379 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 RNF224P0DH78 156 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 SRD5A2P31213 254 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 VEGFCP49767 419 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 NT5C2P49902 561 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 SLC12A3P55017 1021 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 OR1D5P58170 312 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 BPIFB3P59826 476 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 GNB1P62873 340 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 KCNJ10P78508 379 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 SRSF9Q13242 221 aaKnown RBP eCLIP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 TRIM29Q14134 588 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 PPA1Q15181 289 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 PTPN14Q15678 1187 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 RAB12Q6IQ22 244 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 FAM53AQ6NSI3 398 aaPredicted RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 PSRC1Q6PGN9 363 aaPredicted RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 LEKR1Q6ZMV7 388 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 FCRLAQ7L513 359 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF410Q86VK4 478 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 TMEM126BQ8IUX1 230 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF619Q8N2I2 560 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 OR4C15Q8NGM1 316 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 FAM46BQ96A09 425 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 WBP1Q96G27 269 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 XPO4Q9C0E2 1151 aaKnown RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 WWTR1Q9GZV5 400 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 GFRA4Q9GZZ7 299 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 NAPBQ9H115 298 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 EXOC1Q9NV70 894 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 TBC1D13Q9NVG8 400 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 ANO10Q9NW15 660 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 FOXA2Q9Y261 457 aaPredicted RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 PPP2R2CQ9Y2T4 447 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 TDRKHQ9Y2W6 561 aaKnown RBP4.01□□□□□ -1.77
C11orf88-204ENST00000529661 DISP3Q9P2K9 1392 aa4.01□□□□□ -1.77
C11orf88-204ENST00000529661 E5RGE8 158 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 SEC22BO75396 215 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 PRDM1O75626 825 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 GRAP2O75791 330 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 LETM1O95202 739 aaPredicted RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 MT-ND2P03891 347 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 SBK2P0C263 348 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 SLC2A2P11168 524 aaPredicted RBP4□□□□□ -1.77
C11orf88-204ENST00000529661 TYMPP19971 482 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 SMSP52788 366 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 SGCGQ13326 291 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 FCN2Q15485 313 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 MAPK11Q15759 364 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 ACKR1Q16570 336 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 ZNF74Q16587 644 aa4□□□□□ -1.77
C11orf88-204ENST00000529661 IFI44LQ53G44 452 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms