RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TSPAN9O75954 239 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 RHOBTB1O94844 696 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 GCNT3O95395 438 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 YEATS4O95619 227 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 OAS1P00973 400 aaKnown RBP4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CTAGE8P0CG41 777 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CYP2F1P24903 491 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 USP8P40818 1118 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TNFRSF4P43489 277 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 AP3M2P53677 418 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TFAMQ00059 246 aaKnown RBP4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ENPEPQ07075 957 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SLC20A2Q08357 652 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ZBTB17Q13105 803 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 MTF1Q14872 753 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ATL3Q6DD88 541 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 DENND5BQ6ZUT9 1274 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CTAGE4Q8IX94 777 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SYCP3Q8IZU3 236 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 RASGEF1CQ8N431 466 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 GCSAMQ8N6F7 178 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF441Q8N8Z8 693 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 LINC00301Q8NCQ3 95 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 OR8K5Q8NH50 307 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 HM13Q8TCT9 377 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 DUSP19Q8WTR2 217 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SORCS1Q8WY21 1168 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 FIG4Q92562 907 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CD101Q93033 1021 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 PIGTQ969N2 578 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TMEM19Q96HH6 336 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 QRFPRQ96P65 431 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SLC22A12Q96S37 553 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CMKLR1Q99788 373 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 SRSF8Q9BRL6 282 aaKnown RBP4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CBWD1Q9BRT8 395 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 PI4K2AQ9BTU6 479 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TRIM9Q9C026 710 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 UBTD1Q9HAC8 227 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 C2orf42Q9NWW7 574 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 DUS2Q9NX74 493 aaKnown RBP4.51□□□□□ -1.69
CSDE1-212ENST00000529046 CEP250Q9BV73 2442 aa4.51□□□□□ -1.69
CSDE1-212ENST00000529046 TICRRQ7Z2Z1 1910 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 KMT2BQ9UMN6 2715 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 BCLAF3A2AJT9 711 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 OR2A25A4D2G3 310 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 EIF4E1BA6NMX2 242 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SMTNL1A8MU46 457 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 K7EQS6 105 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TIMM44O43615 452 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TMCC2O75069 709 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 LDB3O75112 727 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 APBB3O95704 486 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TNNC2P02585 160 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 AFPP02771 609 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TUBBP07437 444 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ZDHHC11BP0C7U3 371 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 CCDC192P0DO97 292 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 CSRP1P21291 193 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 LMO2P25791 158 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 GNL1P36915 607 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 OPRD1P41143 372 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 IFNAR2P48551 515 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PNLIPRP2P54317 469 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 DMC1Q14565 340 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF234Q14588 700 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PCLAFQ15004 111 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PSMD6Q15008 389 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ZSCAN23Q3MJ62 389 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 STPG1Q5TH74 334 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 TMEM198Q66K66 360 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 C16orf54Q6UWD8 224 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 KBTBD6Q86V97 674 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 RNF113BQ8IZP6 322 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 NAGSQ8N159 534 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 IQUBQ8NA54 791 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 OR5B17Q8NGF7 314 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 OLIG1Q8TAK6 271 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 GOLGA5Q8TBA6 731 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SLC20A1Q8WUM9 679 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SYAP1Q96A49 352 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PCED1BQ96HM7 432 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 HPDLQ96IR7 371 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 CNOT6LQ96LI5 555 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 USP28Q96RU2 1077 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 CYP2S1Q96SQ9 504 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 MTERF1Q99551 399 aaKnown RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 PKP4Q99569 1192 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 SYT15Q9BQS2 421 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 C1QTNF4Q9BXJ3 329 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 MTMR12Q9C0I1 747 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 ELOVL4Q9GZR5 314 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 FAM124BQ9H5Z6 455 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-212ENST00000529046 CSNK1G1Q9HCP0 422 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 AGPAT3Q9NRZ7 376 aa4.5□□□□□ -1.69
CSDE1-212ENST00000529046 FBXL2Q9UKC9 423 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms