RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PROKR1Q8TCW9 393 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 NRGNQ92686 78 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 TACO1Q9BSH4 297 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 DPH7Q9BTV6 452 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SLC7A5P2Q9GIP4 190 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SAYSD1Q9NPB0 183 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SLC22A11Q9NSA0 550 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CCM2LQ9NUG4 571 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 ZFATQ9P243 1243 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 SUCOQ9UBS9 1254 aaKnown RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 TAC3Q9UHF0 121 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 IKZF3Q9UKT9 509 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CORO1CQ9ULV4 474 aaPredicted RBP8.05□□□□□ -1.12
SSBP3-212ENST00000528930 HEATR5BQ9P2D3 2071 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 DOCK10Q96BY6 2186 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 CCDC88CQ9P219 2028 aa8.05□□□□□ -1.12
SSBP3-212ENST00000528930 A0A0J9YVX5 310 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 CCDC151A5D8V7 595 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF839A8K0R7 811 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 CXorf49A8MYA2 514 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MAP2K7O14733 419 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SLC16A5O15375 505 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PIAS1O75925 651 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MED26O95402 600 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SYF2O95926 243 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 C8GP07360 202 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 AGAP20933 346 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 ADSLP30566 484 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 RPA3P35244 121 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 RGS4P49798 205 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 ARSFP54793 590 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PLTPP55058 493 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 GPX6P59796 221 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 DCDP81605 110 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SP140Q13342 867 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 NCF4Q15080 339 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PHKG1Q16816 387 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 TCTE1Q5JU00 501 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 IGFL3Q6UXB1 125 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MBOAT1Q6ZNC8 495 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 TTLL10Q6ZVT0 673 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 CYS1Q717R9 158 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 STRA8Q7Z7C7 330 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SLC26A11Q86WA9 606 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PAQR7Q86WK9 346 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MYO1HQ8N1T3 1032 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 GPATCH11Q8N954 259 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 FBXO25Q8TCJ0 367 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MCOLN3Q8TDD5 553 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PYROXD1Q8WU10 500 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MTFMTQ96DP5 389 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 LINGO1Q96FE5 620 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PDLIM5Q96HC4 596 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 CCDC138Q96M89 665 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SLX1AQ9BQ83 275 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SELENOSQ9BQE4 189 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PLCD4Q9BRC7 762 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 LRRC1Q9BTT6 524 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 NDC1Q9BTX1 674 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 DHRS4Q9BTZ2 278 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PHACTR1Q9C0D0 580 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 ILKAPQ9H0C8 392 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 MRPS30Q9NP92 439 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 GPR83Q9NYM4 423 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 STOX2Q9P2F5 926 aaPredicted RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 SNX7Q9UNH6 387 aa8.04□□□□□ -1.12
SSBP3-212ENST00000528930 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
SSBP3-212ENST00000528930 ANKRD12Q6UB98 2062 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 FAM95CA0A1B0GW59 222 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 TCRBV9S1A1TA0A576 114 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ESYT3A0FGR9 886 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 FAM171A2A8MVW0 826 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 H0YGG7 62 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 DSCR3O14972 297 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 WISP3O95389 354 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF37AP17032 561 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 FOXL2P58012 376 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 VSX2P58304 361 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 TAS2R39P59534 338 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 IL2P60568 153 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ARF3P61204 181 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 TBPL1P62380 186 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CSNK1G2P78368 415 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ABATP80404 500 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 SLC7A5Q01650 507 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 GUCY2DQ02846 1103 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CAV1Q03135 178 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 RELAQ04206 551 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CKAP4Q07065 602 aaKnown RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 TSTA3Q13630 321 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ZNF460Q14592 562 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms