RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 MAT2AP31153 395 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CCT3P49368 545 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 FAM217AQ8IXS0 508 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CHPFQ8IZ52 775 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TSGA13Q96PP4 275 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 HDHD2Q9H0R4 259 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TRIM45Q9H8W5 580 aaPredicted RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 SCML2Q9UQR0 700 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 A0A1W2PQ09 198 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 TNFRSF11BO00300 401 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
LTBP3-210ENST00000528516 ENGP17813 658 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 CDONQ4KMG0 1287 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 CEP68Q76N32 757 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 RGL4Q8IZJ4 473 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 CACTIN-AS1Q8N1I8 211 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 ANGPTL6Q8NI99 470 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 SLC7A6Q92536 515 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 MSANTD3Q96H12 275 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 PYURFQ96I23 114 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 FUBP3Q96I24 572 aaKnown RBP eCLIP17.27■□□□□ 0.36
LTBP3-210ENST00000528516 MAGEB10Q96LZ2 347 aaPredicted RBP17.27■□□□□ 0.36
LTBP3-210ENST00000528516 PKP4Q99569 1192 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 GPR83Q9NYM4 423 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 TMEFF2Q9UIK5 374 aaPredicted RBP17.27■□□□□ 0.36
LTBP3-210ENST00000528516 FBXO10Q9UK96 956 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 SHROOM3Q8TF72 1996 aa17.27■□□□□ 0.36
LTBP3-210ENST00000528516 AKR7A2O43488 359 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 OR7A10O76100 309 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 IFNA14P01570 189 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 HOXD8P13378 290 aaPredicted RBP17.27■□□□□ 0.35
LTBP3-210ENST00000528516 TNFRSF1BP20333 461 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 PKLRP30613 574 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 SRP54P61011 504 aaKnown RBP17.27■□□□□ 0.35
LTBP3-210ENST00000528516 FADDQ13158 208 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 TIMM50Q3ZCQ8 353 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 DLEU7Q6UYE1 221 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 C16orf62Q7Z3J2 963 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 TSPAN33Q86UF1 283 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 C1orf52Q8N6N3 182 aaKnown RBP17.27■□□□□ 0.35
LTBP3-210ENST00000528516 DNASE1L2Q92874 299 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 OR51B5Q9H339 312 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 TREX1Q9NSU2 369 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 ING3Q9NXR8 418 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 NUDT4Q9NZJ9 180 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 PCDHB1Q9Y5F3 818 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 SNX4O95219 450 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 PLEKHM3Q6ZWE6 761 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 CYP4Z2PQ8N1L4 340 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 WDR36Q8NI36 951 aaKnown RBP17.27■□□□□ 0.35
LTBP3-210ENST00000528516 SUSD6Q92537 303 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 C1GALT1C1Q96EU7 318 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 ZNF599Q96NL3 588 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 BTBD2Q9BX70 525 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 ATP13A2Q9NQ11 1180 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 RAD18Q9NS91 495 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 POLHQ9Y253 713 aa17.27■□□□□ 0.35
LTBP3-210ENST00000528516 MAGEB17A8MXT2 336 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DSCR3O14972 297 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 CAPN5O15484 640 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-210ENST00000528516 SLC28A2O43868 658 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 TGFBR2P37173 567 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 MAPK9P45984 424 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DAPP51397 102 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 IER5LQ5T953 404 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ADGRG2Q8IZP9 1017 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 YIPF7Q8N8F6 280 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 C19orf18Q8NEA5 215 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 GON7Q9BXV9 100 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 NAALAD2Q9Y3Q0 740 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-210ENST00000528516 SMLR1H3BR10 107 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 NPPAP01160 153 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 INHAP05111 366 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ERP29P30040 261 aaKnown RBP17.26■□□□□ 0.35
LTBP3-210ENST00000528516 LRRC66Q68CR7 880 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 GET4Q7L5D6 327 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-210ENST00000528516 KRT73Q86Y46 540 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DOCK1Q14185 1865 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 SOX14O95416 240 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ZMAT1Q5H9K5 638 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 FAM205BPQ63HN1 556 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.26■□□□□ 0.35
LTBP3-210ENST00000528516 GPR151Q8TDV0 419 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DOK4Q8TEW6 326 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 RNFT2Q96EX2 444 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DIRAS2Q96HU8 199 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 SMURF1Q9HCE7 757 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 DIABLOQ9NR28 239 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 YIPF1Q9Y548 306 aa17.26■□□□□ 0.35
LTBP3-210ENST00000528516 ALPK2Q86TB3 2170 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 A8MUA0 341 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 PRLP01236 227 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 FABP3P05413 133 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 PRKACAP17612 351 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 CSRP3P50461 194 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 DUSP7Q16829 419 aa17.25■□□□□ 0.35
LTBP3-210ENST00000528516 Q5BKY6 102 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms