RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SNF8Q96H20 258 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 SARGQ9BW04 601 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 SGPP1Q9BX95 441 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 TRIM54Q9BYV2 358 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 DRC3Q9H069 523 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 CXXC4Q9H2H0 198 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 PPANQ9NQ55 473 aaKnown RBP9.93□□□□□ -0.82
CPSF1-203ENST00000527916 TRPC4Q9UBN4 977 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 NPIPA1Q9UND3 350 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 VPS13CQ709C8 3753 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 CSPG4Q6UVK1 2322 aa9.93□□□□□ -0.82
CPSF1-203ENST00000527916 SCN2AQ99250 2005 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 SCN3AQ9NY46 2000 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 LOC102723996A0A087X1L8 192 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 NSA2O95478 260 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 HEXBP07686 556 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ANXA5P08758 320 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ENO2P09104 434 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ITGAMP11215 1152 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 NPPBP16860 134 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 EEF1DP29692 281 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 AVPR1BP47901 424 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ITGA8P53708 1063 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 TBPL1P62380 186 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 PHKG1Q16816 387 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 HECTD2Q5U5R9 776 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 TRMT10BQ6PF06 316 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 TAOK1Q7L7X3 1001 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ADCK2Q7Z695 626 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 SLC26A11Q86WA9 606 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 GHDCQ8N2G8 530 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 FAM98AQ8NCA5 519 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 CAMKVQ8NCB2 501 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ABHD11Q8NFV4 315 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 OR4K1Q8NGD4 311 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 OR56A3Q8NH54 315 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ATL1Q8WXF7 558 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 LINGO1Q96FE5 620 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 CAPZA3Q96KX2 299 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 WDR83Q9BRX9 315 aaKnown RBP9.92□□□□□ -0.82
CPSF1-203ENST00000527916 HAUS8Q9BT25 410 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 YIPF2Q9BWQ6 316 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF700Q9H0M5 742 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 MOCS1Q9NZB8 636 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 KCNN3Q9UGI6 736 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 EDARQ9UNE0 448 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 CHMP2BQ9UQN3 213 aa9.92□□□□□ -0.82
CPSF1-203ENST00000527916 A0A0A6YYC8 382 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 A8MUI8 341 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 EFCAB8A8MWE9 144 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 I3L1I5 382 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 P2RX6O15547 441 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ASNA1O43681 348 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 WISP2O76076 250 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ZWINTO95229 277 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 CELA2AP08217 269 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 CD46P15529 392 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 IGFBP2P18065 325 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 GRK3P35626 688 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 MGAT5Q09328 741 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 NAE1Q13564 534 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 HP1BP3Q5SSJ5 553 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM214Q6NUQ4 689 aaKnown RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 NCCRP1Q6ZVX7 275 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 CYS1Q717R9 158 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 VN1R4Q7Z5H5 301 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 STRA8Q7Z7C7 330 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 DOLPP1Q86YN1 238 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 PLD3Q8IV08 490 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 HORMAD2Q8N7B1 307 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM178AQ8NBL3 297 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ASB5Q8WWX0 329 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF354BQ96LW1 612 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 PWWP2AQ96N64 755 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 DMRTA2Q96SC8 542 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 TUBB6Q9BUF5 446 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ATG10Q9H0Y0 220 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 TSPAN10Q9H1Z9 355 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-203ENST00000527916 KLHL1Q9NR64 748 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ABCF3Q9NUQ8 709 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 NSMCE4AQ9NXX6 385 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 MKL2Q9ULH7 1088 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 SLC22A7Q9Y694 548 aa9.91□□□□□ -0.82
CPSF1-203ENST00000527916 PABPN1LA6NDY0 278 aaKnown RBP9.9□□□□□ -0.82
CPSF1-203ENST00000527916 FAM187AA6NFU0 413 aa9.9□□□□□ -0.82
CPSF1-203ENST00000527916 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
CPSF1-203ENST00000527916 IL10P22301 178 aa9.9□□□□□ -0.82
CPSF1-203ENST00000527916 BCL6P41182 706 aa9.9□□□□□ -0.82
CPSF1-203ENST00000527916 PDIA2Q13087 525 aaKnown RBP9.9□□□□□ -0.82
CPSF1-203ENST00000527916 MYBPHQ13203 477 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms