RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 STSP08842 583 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 RNF224P0DH78 156 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 EFNA3P52797 238 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 ACTN3Q08043 901 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-212ENST00000527887 PDIA2Q13087 525 aaKnown RBP13.38□□□□□ -0.27
CAPN1-212ENST00000527887 NSDHLQ15738 373 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 HP1BP3Q5SSJ5 553 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-212ENST00000527887 CYS1Q717R9 158 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 ADAMTSL2Q86TH1 951 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 PDSS2Q86YH6 399 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 LGI4Q8N135 537 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF740Q8NDX6 193 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 FBXO36Q8NEA4 188 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 NR4A3Q92570 626 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 NEIL2Q969S2 332 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 LPAR4Q99677 370 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 CAPS2Q9BXY5 557 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 WHRNQ9P202 907 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 OARD1Q9Y530 152 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 FAM95CA0A1B0GW59 222 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 TP73O15350 636 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 EIF3HO15372 352 aaKnown RBP eCLIP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 RDH16O75452 317 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 STATHP02808 62 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 CELA2AP08217 269 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 GNAZP19086 355 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 GSTM2P28161 218 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 SNRPNP63162 240 aaKnown RBP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 SLC7A5Q01650 507 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 POU4F1Q01851 419 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 RHAGQ02094 409 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF33BQ06732 778 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 MEP1AQ16819 746 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 CATSPEREQ5SY80 951 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 BEND6Q5SZJ8 279 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 NXPE4Q6UWF7 544 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 TMEM207Q6UWW9 146 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 LANCL3Q6ZV70 420 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 THOC6Q86W42 341 aaKnown RBP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 KLHDC8AQ8IYD2 350 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 TTLQ8NG68 377 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 CDKL2Q92772 493 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 CAVIN3Q969G5 261 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 PEX11GQ96HA9 241 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 MAGEB10Q96LZ2 347 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-212ENST00000527887 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
CAPN1-212ENST00000527887 A8MUI8 341 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 LRRTM2O43300 516 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 CHST10O43529 356 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 H2AFYO75367 372 aaKnown RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 FHP07954 510 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SERPINA6P08185 405 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 HPDP32754 393 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SLC12A2P55011 1212 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TAS2R39P59534 338 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TAS2R50P59544 299 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 REEP5Q00765 189 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 DEFB134Q4QY38 66 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 PAPD4Q6PIY7 484 aaKnown RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 ZBED8Q8IZ13 594 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TCAIMQ8N3R3 496 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SLC5A8Q8N695 610 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 HORMAD2Q8N7B1 307 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 PYROXD1Q8WU10 500 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TSPAN17Q96FV3 270 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TAAR6Q96RI8 345 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 EGFL8Q99944 293 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 PITHD1Q9GZP4 211 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-212ENST00000527887 KCNK13Q9HB14 408 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 GPAMQ9HCL2 828 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 LANCL2Q9NS86 450 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 SLC22A14Q9Y267 594 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 PSAT1Q9Y617 370 aa13.36□□□□□ -0.27
CAPN1-212ENST00000527887 CELSR2Q9HCU4 2923 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
CAPN1-212ENST00000527887 A1L4Q6 167 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms