RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 C2orf74A8MZ97 194 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 STAMBPO95630 424 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 MAPK1P28482 360 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 SPATS1Q496A3 300 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 NANOGP8Q6NSW7 305 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 TRIM73Q86UV7 250 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 FAM129CQ86XR2 697 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 KIAA2013Q8IYS2 634 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 CLHC1Q8NHS4 586 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 PPM1MQ96MI6 270 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 MTERF1Q99551 399 aaKnown RBP17.97■□□□□ 0.47
SMPD1-203ENST00000527275 DPH7Q9BTV6 452 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 TRIM8Q9BZR9 551 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 CLMPQ9H6B4 373 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 NANOGQ9H9S0 305 aa17.97■□□□□ 0.47
SMPD1-203ENST00000527275 DNAAF2Q9NVR5 837 aaKnown RBP17.97■□□□□ 0.47
SMPD1-203ENST00000527275 CDX4O14627 284 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-203ENST00000527275 IL6P05231 212 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 ZNF883P0CG24 379 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 CLDN8P56748 225 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 OR1D5P58170 312 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 ABATP80404 500 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 DDX39BQ13838 428 aaKnown RBP17.96■□□□□ 0.47
SMPD1-203ENST00000527275 SLBPQ14493 270 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMPD1-203ENST00000527275 FAM174BQ3ZCQ3 159 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 RABL3Q5HYI8 236 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 NKAIN2Q5VXU1 208 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 ADNP2Q6IQ32 1131 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 KLHL35Q6PF15 583 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 DLEU7Q6UYE1 221 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 ADCK2Q7Z695 626 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 DHFR2Q86XF0 187 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 NAF1Q96HR8 494 aaKnown RBP17.96■□□□□ 0.47
SMPD1-203ENST00000527275 ZNF570Q96NI8 536 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 EFCAB11Q9BUY7 163 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 SLC6A20Q9NP91 592 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 SEMA4GQ9NTN9 838 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 VPS29Q9UBQ0 182 aa17.96■□□□□ 0.47
SMPD1-203ENST00000527275 CASC3O15234 703 aaKnown RBP17.96■□□□□ 0.46
SMPD1-203ENST00000527275 PROS1P07225 676 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 CMPK1P30085 196 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 NBL1P41271 181 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 CAPZBP47756 277 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 PPM1FP49593 454 aaPredicted RBP17.96■□□□□ 0.46
SMPD1-203ENST00000527275 CCR8P51685 355 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 NR0B2Q15466 257 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 ARMC6Q6NXE6 501 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 GUSBP11Q6P575 273 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 SPESP1Q6UW49 350 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 CYP2R1Q6VVX0 501 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 FAM9CQ8IZT9 166 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 PQLC1Q8N2U9 271 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 Q8N9G6 341 aaPredicted RBP17.96■□□□□ 0.46
SMPD1-203ENST00000527275 OR4K1Q8NGD4 311 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 SLC13A3Q8WWT9 602 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 IRF2BPLQ9H1B7 796 aa17.96■□□□□ 0.46
SMPD1-203ENST00000527275 C6orf203Q9P0P8 240 aaPredicted RBP17.96■□□□□ 0.46
SMPD1-203ENST00000527275 C15orf38-AP3S2A0A0A6YYH1 394 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 CPED1A4D0V7 1026 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 SLC34A2O95436 690 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 PGRP06401 933 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 C8BP07358 591 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 PCSK2P16519 638 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 GPR3P46089 330 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 CSNK1G2P78368 415 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 RHDQ02161 417 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 PWP1Q13610 501 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 SUZ12Q15022 739 aaKnown RBP17.95■□□□□ 0.46
SMPD1-203ENST00000527275 PAGE2BQ5JRK9 111 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 SPANXN4Q5MJ08 99 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 NOXRED1Q6NXP6 359 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 ARPINQ7Z6K5 226 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 OR7G3Q8NG95 312 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 LRGUKQ96M69 825 aa17.95■□□□□ 0.46
SMPD1-203ENST00000527275 RIF1Q5UIP0 2472 aaKnown RBP17.94■□□□□ 0.46
SMPD1-203ENST00000527275 FEZF1A0PJY2 475 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 DLL1O00548 723 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 B4GAT1O43505 415 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 CCNDBP1O95273 360 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PCNAP12004 261 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 HSD3B1P14060 373 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ACPPP15309 386 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 SDC1P18827 310 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 MAGP20916 626 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TACR1P25103 407 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 HSD3B2P26439 372 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 GRIA3P42263 894 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 LSSP48449 732 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 GTF2A1P52655 376 aaPredicted RBP17.94■□□□□ 0.46
SMPD1-203ENST00000527275 EPHA4P54764 986 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 PLIN5Q00G26 463 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 BNIP2Q12982 314 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 MAPKAPK3Q16644 382 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 LPCAT4Q643R3 524 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 MED27Q6P2C8 311 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 DBX2Q6ZNG2 339 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 KBTBD2Q8IY47 623 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 ZUFSPQ96AP4 578 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 CCDC74AQ96AQ1 378 aa17.94■□□□□ 0.46
SMPD1-203ENST00000527275 TMEM74Q96NL1 305 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms