RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 OR6K2Q8NGY2 324 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 SPATA22Q8NHS9 363 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ARRDC2Q8TBH0 407 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 HCAR2Q8TDS4 363 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PDCD6IPQ8WUM4 868 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 IFT81Q8WYA0 676 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 OR8D1Q8WZ84 308 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CPT1BQ92523 772 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CLDN23Q96B33 292 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 SNF8Q96H20 258 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ZNF641Q96N77 438 aaPredicted RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 GABRG3Q99928 467 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 RHOXF2Q9BQY4 288 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 TRIM51Q9BSJ1 452 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PIMREGQ9BSJ6 248 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 GBA3Q9H227 469 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 DPH5Q9H2P9 285 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ZDHHC6Q9H6R6 413 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ATP13A3Q9H7F0 1226 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 FAM114A2Q9NRY5 505 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 POT1Q9NUX5 634 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 IL36AQ9UHA7 158 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 MMP17Q9ULZ9 603 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 RAI2Q9Y5P3 530 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 XIRP2A4UGR9 3374 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TRBV5-3A0A0A0MS03 114 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 A0A1W2PQF6 199 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TCRBV7S3A2A0A539 114 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MAGEB16A2A368 324 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TMEM221A6NGB7 291 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 B4E171 279 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 M0R296 226 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 KPNA3O00505 521 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 DNALI1O14645 258 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 PI15O43692 258 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TLX3O43711 291 aaPredicted RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 SOCS5O75159 536 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 GJB3O75712 270 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PGLSO95336 258 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PIGNO95427 931 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 AP2A1O95782 977 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 DNTTP04053 509 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 UGT2B4P06133 528 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TUBBP07437 444 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 DCNP07585 359 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 ACADMP11310 421 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TPSB2P20231 275 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MCM3P25205 808 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NFKBIAP25963 317 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MAGEA6P43360 314 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MAGEA9P43362 315 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 RPL21P46778 160 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 RPS9P46781 194 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 CXCL12P48061 93 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PCP4P48539 62 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NPY2RP49146 381 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SUOXP51687 545 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PNLIPRP1P54315 467 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PLTPP55058 493 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 BPIFB3P59826 476 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 RPL26P61254 145 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 RPS14P62263 151 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 CAV1Q03135 178 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 CUL1Q13616 776 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 ELAVL3Q14576 367 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 IHHQ14623 411 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 KCNJ11Q14654 390 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MORF4L2Q15014 288 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TRADDQ15628 312 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 TPSAB1Q15661 275 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 ZNF805Q5CZA5 627 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 RNASEH2BQ5TBB1 312 aaKnown RBP4.38□□□□□ -1.71
USP48-211ENST00000526044 KCTD11Q693B1 232 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NAPEPLDQ6IQ20 393 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 LIN54Q6MZP7 749 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 LRRC8BQ6P9F7 803 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 KDELC1Q6UW63 502 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 LRIG3Q6UXM1 1119 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 Q6ZS52 159 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 HOOK3Q86VS8 718 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 HEATR4Q86WZ0 1026 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 KLHDC8BQ8IXV7 354 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SPEM1Q8N4L4 309 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 HDDC3Q8N4P3 179 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 SLC25A41Q8N5S1 370 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 NAT8LQ8N9F0 302 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 DNAAF3Q8N9W5 541 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 MCUQ8NE86 351 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 IPMKQ8NFU5 416 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 OR52K1Q8NGK4 314 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 OR2T3Q8NH03 318 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 STT3BQ8TCJ2 826 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 GANCQ8TET4 914 aa4.38□□□□□ -1.71
USP48-211ENST00000526044 PRCCQ92733 491 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms