RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 BMFQ96LC9 184 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 GPR78Q96P69 363 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 IP6K3Q96PC2 410 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 OR2M4Q96R27 311 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CD180Q99467 661 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CCDC3Q9BQI4 270 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 LRRC61Q9BV99 259 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CARD9Q9H257 536 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 LRRN3Q9H3W5 708 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CD93Q9NPY3 652 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 ASCL3Q9NQ33 180 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 SNX15Q9NRS6 342 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 SLC22A11Q9NSA0 550 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 LIN7CQ9NUP9 197 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 POT1Q9NUX5 634 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 UTP6Q9NYH9 597 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 NDUFAF4Q9P032 175 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 SH3BP4Q9P0V3 963 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CNOT8Q9UFF9 292 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 ANAPC2Q9UJX6 822 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 NEU3Q9UQ49 428 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 SLC17A4Q9Y2C5 497 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 CRYL1Q9Y2S2 319 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 COPG1Q9Y678 874 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 GOLGA4Q13439 2230 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 COL6A6A6NMZ7 2263 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 KNL1Q8NG31 2342 aa4.11□□□□□ -1.75
HDAC2-216ENST00000523628 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
HDAC2-216ENST00000523628 MYO18BQ8IUG5 2567 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CPED1A4D0V7 1026 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 LRRC53A6NM62 1247 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 EFCAB8A8MWE9 144 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 HACD1B0YJ81 288 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 J3QKU1 62 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 DFFAO00273 331 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 TRAFD1O14545 582 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 KMOO15229 486 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 KLK10O43240 276 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PSTPIP1O43586 416 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 LRCH4O75427 683 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 RECQL5O94762 991 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PGLSO95336 258 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CD160O95971 181 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CYP1A2P05177 515 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 DUSP1P28562 367 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 MIPP30301 263 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PPARGP37231 505 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 GARSP41250 739 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 GPR1P46091 355 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PAPOLAP51003 745 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SLC37A1P57057 533 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 UBASH3AP57075 661 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PITX1P78337 314 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 IL9RQ01113 521 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 GALNT2Q10471 571 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 AP1B1Q10567 949 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ILF2Q12905 390 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 DPYSQ14117 519 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SLC18A3Q16572 532 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 C15orf59Q2T9L4 293 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 WSCD2Q2TBF2 565 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 PPP6R3Q5H9R7 873 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 MANEAQ5SRI9 462 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 UBAP2Q5T6F2 1119 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SEL1L3Q68CR1 1132 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SPECC1LQ69YQ0 1117 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ITPRIPL1Q6GPH6 555 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 RAET1GQ6H3X3 334 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 TMEM71Q6P5X7 295 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ALKBH5Q6P6C2 394 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ENPP7Q6UWV6 458 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 LINGO4Q6UY18 593 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 WASH2PQ6VEQ5 465 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 KDM7AQ6ZMT4 941 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 DCDC5Q6ZRR9 648 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 BBS12Q6ZW61 710 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 IRF2BP2Q7Z5L9 587 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 HEATR4Q86WZ0 1026 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 C17orf82Q86X59 251 aaPredicted RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 RFX6Q8HWS3 928 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SLC35F3Q8IY50 421 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 RBFAQ8N0V3 343 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 GALNT4Q8N4A0 578 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 ESX1Q8N693 406 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CCDC185Q8N715 623 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 EMC1Q8N766 993 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 KCTD6Q8NC69 237 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CEP70Q8NHQ1 597 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 GPT2Q8TD30 523 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 DDB2Q92466 427 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 AKAP1Q92667 903 aaKnown RBP eCLIP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 P2RY11Q96G91 374 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 RBM41Q96IZ5 413 aaKnown RBP4.1□□□□□ -1.75
HDAC2-216ENST00000523628 TTC25Q96NG3 672 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 CSPG4P5Q96PW8 444 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 VPS35Q96QK1 796 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 NPAS1Q99742 590 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 TIMM29Q9BSF4 260 aa4.1□□□□□ -1.75
HDAC2-216ENST00000523628 SNRNP25Q9BV90 132 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms