RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PLAG1Q6DJT9 500 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 RPUSD3Q6P087 351 aaKnown RBP15.3■□□□□ 0.04
CLN8-206ENST00000523237 SPATA6LQ8N4H0 392 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 OR1N1Q8NGS0 311 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 SSC4DQ8WTU2 575 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 HAS2Q92819 552 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 USP9XQ93008 2570 aaPredicted RBP15.3■□□□□ 0.04
CLN8-206ENST00000523237 TBC1D20Q96BZ9 403 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 PSMG3-AS1Q96PY0 264 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 CAPS2Q9BXY5 557 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 SLC6A16Q9GZN6 736 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 CNOT10Q9H9A5 744 aaKnown RBP15.3■□□□□ 0.04
CLN8-206ENST00000523237 CLK4Q9HAZ1 481 aaKnown RBP15.3■□□□□ 0.04
CLN8-206ENST00000523237 TEKT2Q9UIF3 430 aa15.3■□□□□ 0.04
CLN8-206ENST00000523237 TRAV17A0A0B4J275 112 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 MAGEB17A8MXT2 336 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 CHST10O43529 356 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 SEMA7AO75326 666 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 C1QAP02745 245 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 SERPINA6P08185 405 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 GP1BBP13224 206 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 CD1DP15813 335 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 HNF4AP41235 474 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 GDF5P43026 501 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 MAGEA4P43358 317 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 TNFSF10P50591 281 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 RAB10P61026 200 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 RHAGQ02094 409 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 ABRAXAS2Q15018 415 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 NSDHLQ15738 373 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 ZKSCAN8Q15776 578 aaPredicted RBP15.29■□□□□ 0.04
CLN8-206ENST00000523237 EXT1Q16394 746 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
CLN8-206ENST00000523237 KBTBD12Q3ZCT8 623 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 CDKL4Q5MAI5 379 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 ABHD17BQ5VST6 288 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 FAM180AQ6UWF9 173 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 ZDHHC24Q6UX98 284 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 GPSM1Q86YR5 675 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 PLPP5Q8NEB5 264 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 TTLQ8NG68 377 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 GRHL3Q8TE85 626 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 UTP15Q8TED0 518 aaKnown RBP15.29■□□□□ 0.04
CLN8-206ENST00000523237 RNF32Q9H0A6 362 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 LANCL2Q9NS86 450 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 PLA2G3Q9NZ20 509 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 WWOXQ9NZC7 414 aa15.29■□□□□ 0.04
CLN8-206ENST00000523237 B3GALT4O96024 378 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 FHP07954 510 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 GSTM2P28161 218 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 GGT5P36269 586 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 RAB8AP61006 207 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 STXBP1P61764 594 aaKnown RBP15.28■□□□□ 0.04
CLN8-206ENST00000523237 OLR1P78380 273 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 ZNF33BQ06732 778 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 ACTN3Q08043 901 aaPredicted RBP15.28■□□□□ 0.04
CLN8-206ENST00000523237 HYAL2Q12891 473 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 NAB1Q13506 487 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 TRADDQ15628 312 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 SFT2D3Q587I9 215 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 TOR1AIP1Q5JTV8 583 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 SULT1C3Q6IMI6 304 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 C8orf74Q6P047 294 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 TMIGD1Q6UXZ0 262 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 SLCO4C1Q6ZQN7 724 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 KRT78Q8N1N4 520 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 ST6GALNAC3Q8NDV1 305 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 M1APQ8TC57 530 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 FAR1Q8WVX9 515 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 KIAA1191Q96A73 305 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 UBXN10Q96LJ8 280 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 LPAR4Q99677 370 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 TMEM79Q9BSE2 394 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLN8-206ENST00000523237 DNAJC11Q9NVH1 559 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 STMN3Q9NZ72 180 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 GPRC5BQ9NZH0 403 aa15.28■□□□□ 0.04
CLN8-206ENST00000523237 CTAGE15A4D2H0 777 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 A8MUI8 341 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 CLGNO14967 610 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 WDPCPO95876 746 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 S100BP04271 92 aaPredicted RBP15.27■□□□□ 0.04
CLN8-206ENST00000523237 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 MYBL2P10244 700 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 OR4D2P58180 307 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 SLBPQ14493 270 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLN8-206ENST00000523237 SLMAPQ14BN4 828 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 OR4D1Q15615 310 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 INAQ16352 499 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 PAPD4Q6PIY7 484 aaKnown RBP15.27■□□□□ 0.04
CLN8-206ENST00000523237 RAPH1Q70E73 1250 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 CTAGE6Q86UF2 777 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLN8-206ENST00000523237 BCORP1Q8N888 145 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 SUN3Q8TAQ9 357 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 CREB3L4Q8TEY5 395 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 TSLPQ969D9 159 aa15.27■□□□□ 0.04
CLN8-206ENST00000523237 SMIM10Q96HG1 83 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms