RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	AIF1L	Q9BQI0	150 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	RBCK1	Q9BYM8	510 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	SLC6A16	Q9GZN6	736 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	RNF32	Q9H0A6	362 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	KLHL31	Q9H511	634 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	AGPAT4	Q9NRZ5	378 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	DYRK1B	Q9Y463	629 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	KCNE2	Q9Y6J6	123 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	DOPEY1	Q5JWR5	2465 aa		11.66	□□□□□ -0.54
VEGFA-223	ENST00000523125	DYTN	A2CJ06	578 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	MAGEB17	A8MXT2	336 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	PHGDH	O43175	533 aa	Known RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	CDC123	O75794	336 aa	Predicted RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	CCDC166	P0CW27	439 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	IL10	P22301	178 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	GGT5	P36269	586 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	GMPR	P36959	345 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	AGTR2	P50052	363 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	PLTP	P55058	493 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	RGS1	Q08116	209 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	ILF2	Q12905	390 aa	Known RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	USP10	Q14694	798 aa	Known RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	ABRAXAS2	Q15018	415 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TGFBI	Q15582	683 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	OR4D1	Q15615	310 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	BTBD16	Q32M84	506 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TMPRSS11B	Q86T26	416 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TBC1D19	Q8N5T2	526 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	ST6GALNAC3	Q8NDV1	305 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TRPV3	Q8NET8	790 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	FBXO25	Q8TCJ0	367 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TSLP	Q969D9	159 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TBC1D20	Q96BZ9	403 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	UBXN10	Q96LJ8	280 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	TAAR6	Q96RI8	345 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	NPAS2	Q99743	824 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	PHACTR1	Q9C0D0	580 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	STMN3	Q9NZ72	180 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	CROCC	Q5TZA2	2017 aa		11.65	□□□□□ -0.54
VEGFA-223	ENST00000523125	CENPE	Q02224	2701 aa		11.65	□□□□□ -0.55
VEGFA-223	ENST00000523125	NCF1B	A6NI72	391 aa	Predicted RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	NCF1C	A8MVU1	366 aa	Predicted RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	PRAMEF4	O60810	478 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	FAM155B	O75949	473 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	WDR47	O94967	919 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	LDLR	P01130	860 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	FH	P07954	510 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	SERPINA6	P08185	405 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	GSTA2	P09210	222 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	C1GALT1C1L	P0DN25	315 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	EDN3	P14138	238 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	NCF1	P14598	390 aa	Predicted RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	CD1D	P15813	335 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	GNAZ	P19086	355 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	GP5	P40197	560 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	HNF4A	P41235	474 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	MAGEA4	P43358	317 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	KCNC1	P48547	511 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLC12A2	P55011	1212 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	RAB8A	P61006	207 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	AP2B1	P63010	937 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	GUCY2D	Q02846	1103 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	RBBP5	Q15291	538 aa	Known RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	NSDHL	Q15738	373 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	KBTBD12	Q3ZCT8	623 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	SFT2D3	Q587I9	215 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	ABHD17B	Q5VST6	288 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	PRAMEF9	Q5VWM5	478 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	HIST2H2BC	Q6DN03	193 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	FRA10AC1	Q70Z53	315 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	ABHD13	Q7L211	337 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	M1AP	Q8TC57	530 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	CDKL2	Q92772	493 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	TSPAN17	Q96FV3	270 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	SLX1A	Q9BQ83	275 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	TMEM79	Q9BSE2	394 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	COPG2	Q9UBF2	871 aa		11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	UTP11	Q9Y3A2	253 aa	Known RBP	11.64	□□□□□ -0.55
VEGFA-223	ENST00000523125	NBPF19	A0A087WUL8	3843 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TRAV17	A0A0B4J275	112 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	OR5H15	A6NDH6	313 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125		A8MUI8	341 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	FAM227A	F5H4B4	570 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	DDAH2	O95865	285 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TBX6	O95947	436 aa	Predicted RBP	11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	STMN1	P16949	149 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TDGF1P3	P51864	188 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	RAB10	P61026	200 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	SKP1	P63208	163 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	BTG2	P78543	158 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	CAV1	Q03135	178 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	ZNF33B	Q06732	778 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	EXT1	Q16394	746 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	FBXO48	Q5FWF7	155 aa		11.63	□□□□□ -0.55
VEGFA-223	ENST00000523125	TOR1AIP1	Q5JTV8	583 aa		11.63	□□□□□ -0.55

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