RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ICAM2P13598 275 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 CD1DP15813 335 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 KCNC1P48547 511 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 ARG2P78540 354 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 CAV1Q03135 178 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 RGS1Q08116 209 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 EFTUD2Q15029 972 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPIDR-220ENST00000522900 SLCO4C1Q6ZQN7 724 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 PPM1NQ8N819 430 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 GRHL3Q8TE85 626 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 FBF1Q8TES7 1133 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 CREB3L4Q8TEY5 395 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 HAS2Q92819 552 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 TSLPQ969D9 159 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 TSPAN17Q96FV3 270 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 SMIM10Q96HG1 83 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 TMEM79Q9BSE2 394 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 LRRC1Q9BTT6 524 aa17.61■□□□□ 0.41
SPIDR-220ENST00000522900 USP9XQ93008 2570 aaPredicted RBP17.6■□□□□ 0.41
SPIDR-220ENST00000522900 ANKUB1A6NFN9 424 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 PRAMEF4O60810 478 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 WDPCPO95876 746 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 CYC1P08574 325 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 STMN1P16949 149 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 GUCY2DQ02846 1103 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 ILF2Q12905 390 aaKnown RBP17.6■□□□□ 0.41
SPIDR-220ENST00000522900 ABRAXAS2Q15018 415 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 NSDHLQ15738 373 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 ZKSCAN8Q15776 578 aaPredicted RBP17.6■□□□□ 0.41
SPIDR-220ENST00000522900 BTBD16Q32M84 506 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 TOR1AIP1Q5JTV8 583 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 GRTP1Q5TC63 336 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 PRAMEF9Q5VWM5 478 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 FCRLBQ6BAA4 426 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 GPSM1Q86YR5 675 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 PLPP5Q8NEB5 264 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 TRPV3Q8NET8 790 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 UBXN10Q96LJ8 280 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 OR1F2PQ96R84 312 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 PHACTR1Q9C0D0 580 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 STMN3Q9NZ72 180 aa17.6■□□□□ 0.41
SPIDR-220ENST00000522900 DOPEY2Q9Y3R5 2298 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 DYTNA2CJ06 578 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 A8MUI8 341 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 FAM227AF5H4B4 570 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 B4GALT2O60909 372 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 UQCRHP07919 91 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 GNAZP19086 355 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 IL10P22301 178 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 SPRP35270 261 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 GGT5P36269 586 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 HSPA7P48741 367 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 ST13P50502 369 aaKnown RBP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 TNFSF10P50591 281 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 RAB10P61026 200 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 DLG1Q12959 904 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 SFT2D3Q587I9 215 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 PLAG1Q6DJT9 500 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 ABHD13Q7L211 337 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 CMC1Q7Z7K0 106 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 TBC1D20Q96BZ9 403 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 MAGEB10Q96LZ2 347 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 C16orf45Q96MC5 204 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 AGPAT4Q9NRZ5 378 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 C19orf25Q9UFG5 118 aaPredicted RBP17.59■□□□□ 0.41
SPIDR-220ENST00000522900 LRRK2Q5S007 2527 aa17.59■□□□□ 0.41
SPIDR-220ENST00000522900 MAGEB17A8MXT2 336 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 H2AFYO75367 372 aaKnown RBP17.58■□□□□ 0.4
SPIDR-220ENST00000522900 FHP07954 510 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 SERPINA6P08185 405 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 AGTR2P50052 363 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 ATP6V0D1P61421 351 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 BTG2P78543 158 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 ACTN3Q08043 901 aaPredicted RBP17.58■□□□□ 0.4
SPIDR-220ENST00000522900 SLBPQ14493 270 aaKnown RBP eCLIP17.58■□□□□ 0.4
SPIDR-220ENST00000522900 UBAP2Q5T6F2 1119 aaKnown RBP17.58■□□□□ 0.4
SPIDR-220ENST00000522900 HIST2H2BCQ6DN03 193 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 SSC4DQ8WTU2 575 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 FAR1Q8WVX9 515 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 KIAA1191Q96A73 305 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 RHBGQ9H310 441 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 ZDHHC18Q9NUE0 388 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 DNAJC11Q9NVH1 559 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 WWOXQ9NZC7 414 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 PTBP2Q9UKA9 531 aaKnown RBP17.58■□□□□ 0.4
SPIDR-220ENST00000522900 ASB1Q9Y576 335 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 PTPN13Q12923 2485 aa17.58■□□□□ 0.4
SPIDR-220ENST00000522900 A0A0G2JN53 185 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 E2F3O00716 465 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 URI1O94763 535 aaPredicted RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 SLC35E2BP0CK96 405 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 GP1BBP13224 206 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 EPORP19235 508 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 HNRNPH1P31943 449 aaKnown RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 OR4D2P58180 307 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 BTN3A2P78410 334 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 SRSF11Q05519 484 aaKnown RBP17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ZNF33BQ06732 778 aa17.57■□□□□ 0.4
SPIDR-220ENST00000522900 ABHD17BQ5VST6 288 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms