RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MAGEA2P43356 314 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 PIGKQ92643 395 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 ISOC1Q96CN7 298 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 NEUROD4Q9HD90 331 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 SERINC1Q9NRX5 453 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 P2RX2Q9UBL9 471 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 ACSL1P33121 698 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 ENTPD1P49961 510 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 PTPRCAPQ14761 206 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 TTC9BQ8N6N2 239 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 CANT1Q8WVQ1 401 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 PKP2Q99959 881 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 PLCL2Q9UPR0 1127 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 J3QRK9 145 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 SLC9B1Q4ZJI4 515 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 TRUB1Q8WWH5 349 aaKnown RBP15.66■□□□□ 0.1
USP42-207ENST00000521713 FBXL8Q96CD0 374 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 ZNF696Q9H7X3 374 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 SNTG1Q9NSN8 517 aa15.66■□□□□ 0.1
USP42-207ENST00000521713 GLI3P10071 1580 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 MAGEB3O15480 346 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 MT-ND1P03886 318 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 ACRV1P26436 265 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 CLCN4P51793 760 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 ACOT12Q8WYK0 555 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 KIAA1143Q96AT1 154 aaPredicted RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 KCTD7Q96MP8 289 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 IKZF2Q9UKS7 526 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 PDCD5O14737 125 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 SERPINA3P01011 423 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 HOXC12P31275 282 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 CDH12P55289 794 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 MPP7Q5T2T1 576 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 PAMR1Q6UXH9 720 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 SCD5Q86SK9 330 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 APCDD1Q8J025 514 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 C7orf57Q8NEG2 295 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 Q9N2J8 555 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 SEC14L4Q9UDX3 406 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 UTS2RQ9UKP6 389 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 BHMG1C9JSJ3 638 aaPredicted RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 JMJD7P0C870 316 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 CD70P32970 193 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 GDF5P43026 501 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 CRTC2Q53ET0 693 aaPredicted RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 ZNF613Q6PF04 617 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 Q8N9G6 341 aaPredicted RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 SORCS1Q8WY21 1168 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 FCRL4Q96PJ5 515 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 FBP2O00757 339 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 ARPC2O15144 300 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 DNAJA1P31689 397 aaKnown RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 RBM34P42696 430 aaKnown RBP15.65■□□□□ 0.1
USP42-207ENST00000521713 DSTNP60981 165 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 ZNF181Q2M3W8 571 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 FAM26DQ5JW98 314 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 ZUFSPQ96AP4 578 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 FRMD6Q96NE9 622 aa15.65■□□□□ 0.1
USP42-207ENST00000521713 POLR2CP19387 275 aaPredicted RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 SLC9A3P48764 834 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 UBE2Q1Q7Z7E8 422 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 KCT2Q8NC54 265 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 TRMT2BQ96GJ1 504 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 MGME1Q9BQP7 344 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 SLC35A5Q9BS91 424 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 SLC6A15Q9H2J7 730 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 MKKSQ9NPJ1 570 aaPredicted RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 H0YAE9 185 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 CLIC1O00299 241 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 CPNE3O75131 537 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 NCK1P16333 377 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 RAB8AP61006 207 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 PON2Q15165 354 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 PLA2G15Q8NCC3 412 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 OR52J3Q8NH60 311 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 POLR2J2Q9GZM3 115 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 PCDHAC1Q9H158 963 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 FAM120CQ9NX05 1096 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 LYARQ9NX58 379 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 MS4A12Q9NXJ0 267 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 IGLON5A6NGN9 336 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 GADD45GO95257 159 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 C6P13671 934 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 MTPNP58546 118 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 DNAJB13P59910 316 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 HNRNPKP61978 463 aaKnown RBP eCLIP15.64■□□□□ 0.09
USP42-207ENST00000521713 PPP2R2BQ00005 443 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 RAPSNQ13702 412 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 EIF5AL1Q6IS14 154 aaKnown RBP15.64■□□□□ 0.09
USP42-207ENST00000521713 ALKBH2Q6NS38 261 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 CREB3L1Q96BA8 519 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 ALKBH4Q9NXW9 302 aa15.64■□□□□ 0.09
USP42-207ENST00000521713 GMFGO60234 142 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 JUNDP17535 347 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 CDH15P55291 814 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SLC10A2Q12908 348 aaPredicted RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 SCARB2Q14108 478 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms