RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MS4A6EQ96DS6 147 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 C19orf60Q96EN9 201 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 F2RL3Q96RI0 385 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 CTRCQ99895 268 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 CENPKQ9BS16 269 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 ZPBPQ9BS86 351 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 NDC1Q9BTX1 674 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 DDA1Q9BW61 102 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 NUF2Q9BZD4 464 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 KLHL31Q9H511 634 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 VPS29Q9UBQ0 182 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 PISDQ9UG56 409 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 SATB2Q9UPW6 733 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 PCDHB3Q9Y5E6 796 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 PCDHGA8Q9Y5G5 932 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 PTGDR2Q9Y5Y4 395 aa16.94■□□□□ 0.3
SDC2-205ENST00000520233 PMS2P1A4D2B8 440 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 NPIPB8E9PQR5 432 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 ZNF195O14628 629 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 ZNF749O43361 778 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 RSL1D1O76021 490 aaKnown RBP16.93■□□□□ 0.3
SDC2-205ENST00000520233 SEMA3DO95025 777 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 SMIM10L1P0DMW3 83 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 ALOX15P16050 662 aaPredicted RBP16.93■□□□□ 0.3
SDC2-205ENST00000520233 PRPH2P23942 346 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 TGM3Q08188 693 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 MUM1Q2TAK8 710 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 PWWP2BQ6NUJ5 590 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 FOXR1Q6PIV2 292 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 ABHD13Q7L211 337 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 DGLUCYQ7Z3D6 616 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 MARCH9Q86YJ5 346 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 TMEM126BQ8IUX1 230 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 OR2T11Q8NH01 316 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
SDC2-205ENST00000520233 RGMAQ96B86 450 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 SMIM10Q96HG1 83 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 C10orf90Q96M02 699 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 C3orf30Q96M34 536 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 TEFMQ96QE5 360 aaKnown RBP16.93■□□□□ 0.3
SDC2-205ENST00000520233 ASPSCR1Q9BZE9 553 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 B3GNT4Q9C0J1 378 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 POLR1BQ9H9Y6 1135 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 CUTCQ9NTM9 273 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 RIC8BQ9NVN3 520 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 SRPK3Q9UPE1 567 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 PCDHGA3Q9Y5H0 932 aa16.93■□□□□ 0.3
SDC2-205ENST00000520233 MDC1Q14676 2089 aaKnown RBP16.92■□□□□ 0.3
SDC2-205ENST00000520233 GMNCA6NCL1 334 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 ERI3O43414 337 aaKnown RBP16.92■□□□□ 0.3
SDC2-205ENST00000520233 SCRG1O75711 98 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 TIAF1O95411 115 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 HBQ1P09105 142 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 ZNF888P0CJ79 500 aaPredicted RBP16.92■□□□□ 0.3
SDC2-205ENST00000520233 ALOX12P18054 663 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 RAP1GDS1P52306 607 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 TBL3Q12788 808 aaKnown RBP16.92■□□□□ 0.3
SDC2-205ENST00000520233 FAM53BQ14153 422 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 HERC3Q15034 1050 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 PRAMEF17Q5VTA0 474 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 TRIM40Q6P9F5 258 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 ABHD17CQ6PCB6 329 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 MAVSQ7Z434 540 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 UBE3DQ7Z6J8 389 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 METTL4Q8N3J2 472 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 ZCCHC10Q8TBK6 192 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 CHTF18Q8WVB6 975 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 KCNC2Q96PR1 638 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 TBCDQ9BTW9 1192 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 TRIM55Q9BYV6 548 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 AHSPQ9NZD4 102 aa16.92■□□□□ 0.3
SDC2-205ENST00000520233 MRPS2Q9Y399 296 aaKnown RBP16.92■□□□□ 0.3
SDC2-205ENST00000520233 C4orf51C9J302 202 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 SAP18O00422 153 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 PLPP1O14494 284 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 DSCR3O14972 297 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 LSM1O15116 133 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 VPS4BO75351 444 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 TROVE2P10155 538 aaKnown RBP eCLIP16.91■□□□□ 0.3
SDC2-205ENST00000520233 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 PLA2G16P53816 162 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 SEC24CP53992 1094 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 RAB8AP61006 207 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 SNRPNP63162 240 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 FOXC1Q12948 553 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 NR6A1Q15406 480 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 SPDYAQ5MJ70 313 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 TMEM164Q5U3C3 297 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 OR4C11Q6IEV9 310 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 RHBDD2Q6NTF9 364 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 NIPAL1Q6NVV3 410 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 PMEPA1Q969W9 287 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 METTL2AQ96IZ6 378 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 PPP1R36Q96LQ0 422 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 PPP3R2Q96LZ3 170 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms