RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SORDQ00796 357 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 UBXN1Q04323 297 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 SLC10A2Q12908 348 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 PTK6Q13882 451 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 FAM53BQ14153 422 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 HSPB2Q16082 182 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 NDUFA9Q16795 377 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 HSP90AA4PQ58FG1 418 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 CMPK2Q5EBM0 449 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 EMC4Q5J8M3 183 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 C1QTNF12Q5T7M4 302 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 RIPPLY2Q5TAB7 128 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 MEI1Q5TIA1 1274 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TTC23LQ6PF05 361 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 C16orf87Q6PH81 154 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 IRF2BP2Q7Z5L9 587 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 WDR53Q7Z5U6 358 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 SLC13A5Q86YT5 568 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 RELL1Q8IUW5 271 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 DCUN1D3Q8IWE4 304 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 AMER3Q8N944 861 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TC2NQ8N9U0 490 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 LMNTD1Q8N9Z9 388 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 LINC01555Q8NAE3 123 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ZFP62Q8NB50 900 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 OR4K2Q8NGD2 314 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 OR8K1Q8NGG5 319 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 SPATA22Q8NHS9 363 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 EPS8L3Q8TE67 593 aaKnown RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 FBF1Q8TES7 1133 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 SMPDL3BQ92485 455 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ELMO1Q92556 727 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 RNASE6Q93091 150 aaKnown RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 RERGQ96A58 199 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 LRRC45Q96CN5 670 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ERP27Q96DN0 273 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 MMABQ96EY8 250 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 C10orf90Q96M02 699 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 C16orf45Q96MC5 204 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 PWWP2AQ96N64 755 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 OLFM3Q96PB7 478 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ERGIC2Q96RQ1 377 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 CYTH2Q99418 400 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 LPAR4Q99677 370 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 NRTNQ99748 197 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TSSK1BQ9BXA7 367 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 DRC3Q9H069 523 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ISCUQ9H1K1 167 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TRMT1Q9NXH9 659 aaKnown RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ANKRD10Q9NXR5 420 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TAB2Q9NYJ8 693 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 MYO1AQ9UBC5 1043 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 Q9UFV3 132 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 MTRF1LQ9UGC7 380 aaKnown RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ANAPC7Q9UJX3 599 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 PCDHGB3Q9Y5G1 929 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ARL5AQ9Y689 179 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 EML6Q6ZMW3 1958 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RAI1Q7Z5J4 1906 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TRBV5-4A0A0C4DH59 114 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 A0A0J9YVX5 310 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 A0A0U1RQJ8 604 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TMEM238LA0A1B0GVL6 79 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC5A10A0PJK1 596 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ERICH4A6NGS2 130 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CLCA1A8K7I4 914 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 H0YIG0 161 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 H7C0S8 307 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CLDN4O14493 209 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 NDC80O14777 642 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SMAD7O15105 426 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CTIFO43310 598 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 CTSVO60911 334 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ADAM11O75078 769 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 MFAP3LO75121 409 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TNFRSF21O75509 655 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 EIF2S1P05198 315 aaKnown RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 OR56A5P0C7T3 313 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 TPBGLP0DKB5 382 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 GLI4P10075 376 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RBP3P10745 1247 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 IL10P22301 178 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 GNALP38405 381 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 GRIA3P42263 894 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 NR2C2P49116 596 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 HLCSP50747 726 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 XIAPP98170 497 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 MEF2AQ02078 507 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 RELAQ04206 551 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 ITIH4Q14624 930 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 PRTGQ2VWP7 1150 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 GXYLT1Q4G148 440 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 NDUFAF5Q5TEU4 345 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 MFSD4BQ5TF39 518 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 KCTD11Q693B1 232 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 SLC9A4Q6AI14 798 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 FCRLBQ6BAA4 426 aa4.57□□□□□ -1.68
SDCBP-207ENST00000520168 KIAA0930Q6ICG6 404 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-207ENST00000520168 FRMPD2BQ6IN97 320 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms