RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 C5orf22Q49AR2 442 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FASTKD1Q53R41 847 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 TAF1BQ53T94 588 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SERTAD4-AS1Q5TG53 156 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FAM91A1Q658Y4 838 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 ATG9BQ674R7 924 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 PDPK2PQ6A1A2 396 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 KIAA0930Q6ICG6 404 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 RFWD3Q6PCD5 774 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 IL20RBQ6UXL0 311 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FAM83HQ6ZRV2 1179 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FAM43BQ6ZT52 329 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 CHST9Q7L1S5 443 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 TMCO2Q7Z6W1 182 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 LINC00523Q86TU6 105 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 ZC3HC1Q86WB0 502 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 NUDCD3Q8IVD9 361 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 C10orf107Q8IVU9 208 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 DENND6AQ8IWF6 608 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 LGI2Q8N0V4 545 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SLC39A11Q8N1S5 342 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 EXD3Q8N9H8 876 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 OR52K2Q8NGK3 314 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 ARRDC2Q8TBH0 407 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 NELL1Q92832 810 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 PSMG2Q969U7 264 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 IGSF21Q96ID5 467 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 CNDP2Q96KP4 475 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 RPRD1AQ96P16 312 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 PPP1R2P1Q96PQ5 205 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 TMEM237Q96Q45 408 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 RANBP9Q96S59 729 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF347Q96SE7 839 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SORT1Q99523 831 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 NMUR2Q9GZQ4 415 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 RHOJQ9H4E5 214 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FBRSL1Q9HCM7 1045 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SLC2A4RGQ9NR83 387 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 FBXO6Q9NRD1 293 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 TXLNGQ9NUQ3 528 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SMPD4Q9NXE4 827 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 TMEM216Q9P0N5 145 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 MARCOQ9UEW3 520 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 AAR2Q9Y312 384 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 ADAM18Q9Y3Q7 739 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 MTF2Q9Y483 593 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 SHROOM3Q8TF72 1996 aa4.69□□□□□ -1.66
CTNNA1-212ENST00000518919 NUP205Q92621 2012 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 GREB1Q4ZG55 1949 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 A0A096LPK6 155 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 A0A0D9SEW6 157 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ARHGAP10A1A4S6 786 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 MAGEB16A2A368 324 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF840PA6NDX5 716 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 A8MV72 311 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 F5H5T6 163 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 AP3B1O00203 1094 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 MGRN1O60291 552 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ACSL4O60488 711 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 PAGE4O60829 102 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 WISP3O95389 354 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ATP6V1G2O95670 118 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 KLKB1P03952 638 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 C2P06681 752 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ELFN1P0C7U0 828 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 SLC35E2BP0CK96 405 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 FCGR2AP12318 317 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 CORO1AP31146 461 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 OR1D2P34982 312 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 AVPR1AP37288 418 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 NUMBP49757 651 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 RPS24P62847 133 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 PDE1BQ01064 536 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 RHAGQ02094 409 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 PLP2Q04941 152 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ZBTB16Q05516 673 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 IL10RBQ08334 325 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 DLG1Q12959 904 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 CSTF3Q12996 717 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 STX3Q13277 289 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 TUBA3CQ13748 450 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 HNRNPDQ14103 355 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 TAF11Q15544 211 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 RPE65Q16518 533 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 USP41Q3LFD5 358 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF789Q5FWF6 425 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 RABGAP1LQ5R372 815 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 C1QTNF12Q5T7M4 302 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 TSTD2Q5T7W7 516 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF470Q6ECI4 717 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 TUBA3EQ6PEY2 450 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF474Q6S9Z5 364 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 MOB3CQ70IA8 216 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 MRGPREQ86SM8 312 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 TMEM150AQ86TG1 271 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 GPAT4Q86UL3 456 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 ARID3BQ8IVW6 561 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 CEP97Q8IW35 865 aa4.68□□□□□ -1.66
CTNNA1-212ENST00000518919 CENPLQ8N0S6 344 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms