RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 GPAT3Q53EU6 434 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 COX20Q5RI15 118 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 TRAF7Q6Q0C0 670 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 ZNF852Q6ZMS4 543 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 RNF130Q86XS8 419 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 UBASH3BQ8TF42 649 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 IL4I1Q96RQ9 567 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 ATG10Q9H0Y0 220 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 ZFYVE1Q9HBF4 777 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
PCM1-203ENST00000517545 A0A0X1KG70 313 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 FAM227AF5H4B4 570 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CLDN11O75508 207 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 ANXA8P13928 327 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 BPIP17213 487 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PRPH2P23942 346 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 POU1F1P28069 291 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 ABRQ12979 859 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 BOP1Q14137 746 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 GANABQ14697 944 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 UBE2R2Q712K3 238 aaPredicted RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 CSGALNACT1Q8TDX6 532 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 C11orf54Q9H0W9 315 aaPredicted RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 MBD1Q9UIS9 605 aaPredicted RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 CPNE3O75131 537 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 VNN2O95498 520 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 YES1P07947 543 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 AOAHP28039 575 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 SLC11A2P49281 568 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 RHOAP61586 193 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CEP78Q5JTW2 689 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 ADNP2Q6IQ32 1131 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 OR8J2Q8NGG1 315 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 WBP2Q969T9 261 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CITED4Q96RK1 184 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 FAM129BQ96TA1 746 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 DUSP26Q9BV47 211 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 FAM120CQ9NX05 1096 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 C1orf226A1L170 272 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 GABRR3A8MPY1 467 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CCNB2O95067 398 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 TRBC1P01850 177 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 IRF1P10914 325 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 ETFAP13804 333 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CD22P20273 847 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 SSTR4P31391 388 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CCR7P32248 378 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CNR2P34972 360 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 HTR2BP41595 481 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 CRATP43155 626 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 P2RX3P56373 397 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PSPHP78330 225 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 HSPA14Q0VDF9 509 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 DUSP4Q13115 394 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 MACC1Q6ZN28 852 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 PTCHD4Q6ZW05 846 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 SLC44A2Q8IWA5 706 aaPredicted RBP11.89□□□□□ -0.51
PCM1-203ENST00000517545 MYO19Q96H55 970 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 GPATCH2Q9NW75 528 aa11.89□□□□□ -0.51
PCM1-203ENST00000517545 SMIM30A4D0T7 59 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 CYP17A1P05093 508 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 MAP2K5Q13163 448 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 CHIT1Q13231 466 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 GGTA1PQ4G0N0 100 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 TOR1AIP1Q5JTV8 583 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 METTL2BQ6P1Q9 378 aaKnown RBP11.88□□□□□ -0.51
PCM1-203ENST00000517545 WDR53Q7Z5U6 358 aaPredicted RBP11.88□□□□□ -0.51
PCM1-203ENST00000517545 VRK3Q8IV63 474 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 L3MBTL4Q8NA19 623 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 C9orf43Q8TAL5 461 aaPredicted RBP11.88□□□□□ -0.51
PCM1-203ENST00000517545 BHMTQ93088 406 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 RERGLQ9H628 205 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 GIMAP4Q9NUV9 329 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 ACOXLQ9NUZ1 547 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 GLYATL1P3A0A0U1RQE8 302 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 B4DXG7 233 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 C1SP09871 688 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 ATF6P18850 670 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 PCGF2P35227 344 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 HKDC1Q2TB90 917 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 ERAP2Q6P179 960 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 PRR23CQ6ZRP0 262 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 C11orf65Q8NCR3 313 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 HCAR2Q8TDS4 363 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 PTPN18Q99952 460 aa11.88□□□□□ -0.51
PCM1-203ENST00000517545 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
PCM1-203ENST00000517545 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms