RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 SNF8Q96H20 258 aa13.72□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MS4A14Q96JA4 679 aa13.72□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TINAGQ9UJW2 476 aa13.72□□□□□ -0.21
SCARNA20.5-201ENST00000516991 OTOGQ6ZRI0 2925 aa13.72□□□□□ -0.21
SCARNA20.5-201ENST00000516991 URADA6NGE7 173 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NPIPA5E9PKD4 350 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC25A12O75746 678 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SP1P08047 785 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 AHRP35869 848 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ADORA2A-AS1P86434 159 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CCZ1BP86790 482 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CCZ1P86791 482 aaPredicted RBP13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CSHL1Q14406 222 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 DEFB134Q4QY38 66 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC25A25Q6KCM7 469 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GALNTL5Q7Z4T8 443 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 RPS19BP1Q86WX3 136 aaKnown RBP13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SHISA5Q8N114 240 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GPATCH11Q8N954 259 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 OR5T3Q8NGG3 340 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ELP5Q8TE02 316 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 OLFM1Q99784 485 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HES7Q9BYE0 225 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GPAMQ9HCL2 828 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ANKRD10Q9NXR5 420 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 LRFN1Q9P244 771 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ZFP69BQ9UJL9 534 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NPIPA1Q9UND3 350 aa13.71□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GTF3C1Q12789 2109 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 FBN2P35556 2912 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PSMD12O00232 456 aaPredicted RBP13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 FCHO1O14526 889 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CHST10O43529 356 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NME2P1O60361 137 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NEURL1O76050 574 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TSPAN12O95859 305 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SERPIND1P05546 499 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF888P0CJ79 500 aaPredicted RBP13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 RNH1P13489 461 aaKnown RBP13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ABOP16442 354 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ZNF24P17028 368 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NME2P22392 152 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 GABRB3P28472 473 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SCTRP47872 440 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 REEP5Q00765 189 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SPINK14Q6IE38 97 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SIAH3Q8IW03 269 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 POGLUT1Q8NBL1 392 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ARMC2Q8NEN0 867 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TRPV3Q8NET8 790 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ACTRT1Q8TDG2 376 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PHF10Q8WUB8 498 aaKnown RBP13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SLC5A11Q8WWX8 675 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TMEM125Q96AQ2 219 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PYCR2Q96C36 320 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CERS2Q96G23 380 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 OR4K3Q96R72 315 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TSPAN10Q9H1Z9 355 aaPredicted RBP13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CDCP1Q9H5V8 836 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PELI2Q9HAT8 420 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MEMO1Q9Y316 297 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
SCARNA20.5-201ENST00000516991 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 ASNA1O43681 348 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MAN1A2O60476 641 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PRMT3O60678 531 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 B4GALT2O60909 372 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CLDN14O95500 239 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 AHSGP02765 367 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TPP2P29144 1249 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SSTR2P30874 369 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CYB561P49447 251 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MAPKAPK3Q16644 382 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 NEIL2Q969S2 332 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 MTFMTQ96DP5 389 aaKnown RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 LURAP1Q96LR2 239 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PTCHD1Q96NR3 888 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 AIF1LQ9BQI0 150 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TRIM51Q9BSJ1 452 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TRIM8Q9BZR9 551 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TRIM45Q9H8W5 580 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PRDM9Q9NQV7 894 aa13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 KLF13Q9Y2Y9 288 aaPredicted RBP13.69□□□□□ -0.22
SCARNA20.5-201ENST00000516991 F8P00451 2351 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 IGKV3D-11A0A0A0MRZ8 115 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TCRBV16S1A1N1A0A5B0 115 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 CES2O00748 559 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 PRRG2O14669 202 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 WISP2O76076 250 aa13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
SCARNA20.5-201ENST00000516991 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms