RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ARFIP1P53367 373 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 SESN3P58005 492 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 MTPNP58546 118 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 MRPS22P82650 360 aaKnown RBP19.23■□□□□ 0.67
TRIO-223ENST00000515710 LCN8Q6JVE9 175 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 PAQR7Q86WK9 346 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 GKN2Q86XP6 184 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 AVL9Q8NBF6 648 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 GOLM1Q8NBJ4 401 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 FLVCR1-AS1Q8TAF5 88 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 OR2A14Q96R47 310 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 THUMPD3Q9BV44 507 aaKnown RBP19.23■□□□□ 0.67
TRIO-223ENST00000515710 ACTR10Q9NZ32 417 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 ANKMY1Q9P2S6 941 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 BTNL2Q9UIR0 455 aa19.23■□□□□ 0.67
TRIO-223ENST00000515710 TCRBV3S1A0A5B6 114 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 ARHGAP10A1A4S6 786 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 AQP12BA6NM10 295 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 GBAP04062 536 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 HOXB9P17482 250 aaPredicted RBP19.22■□□□□ 0.67
TRIO-223ENST00000515710 BCKDHBP21953 392 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 TAS2R50P59544 299 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 CYP4F3Q08477 520 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 PDE7AQ13946 482 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 SELPLGQ14242 412 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 FXNQ16595 210 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 AASDHQ4L235 1098 aaPredicted RBP19.22■□□□□ 0.67
TRIO-223ENST00000515710 LRRC74BQ6ZQY2 392 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 ANKRD46Q86W74 232 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 IFNEQ86WN2 208 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 PROSER1Q86XN7 944 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 AQP12AQ8IXF9 295 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 INPP5KQ9BT40 448 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 ZNF717Q9BY31 904 aaPredicted RBP19.22■□□□□ 0.67
TRIO-223ENST00000515710 DLGAP2Q9P1A6 1054 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 SPASTQ9UBP0 616 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 EXO1Q9UQ84 846 aaKnown RBP19.22■□□□□ 0.67
TRIO-223ENST00000515710 BTBD3Q9Y2F9 522 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 SNX13Q9Y5W8 968 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 PLXND1Q9Y4D7 1925 aa19.22■□□□□ 0.67
TRIO-223ENST00000515710 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 LRIT2A6NDA9 550 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 C2orf74A8MZ97 194 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 ZW10O43264 779 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 TNFSF14O43557 240 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 FURINP09958 794 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 UGT2B7P16662 529 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 POLR2CP19387 275 aaPredicted RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 PTPN6P29350 595 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 VHLP40337 213 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 NXPH1P58417 271 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 RPS15AP62244 130 aaKnown RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 WDR45BQ5MNZ6 344 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 TMEM26Q6ZUK4 368 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 NUDT13Q86X67 352 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 TMEFF1Q8IYR6 380 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 SDR16C5Q8N3Y7 309 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 TNIP2Q8NFZ5 429 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 CCDC115Q96NT0 180 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 PANX1Q96RD7 426 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 SH3BP4Q9P0V3 963 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 EGFL7Q9UHF1 273 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 PCDHB3Q9Y5E6 796 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 PCDHGA4Q9Y5G9 962 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 FANCMQ8IYD8 2048 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 SERPIND1P05546 499 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 HHEXQ03014 270 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 ADPRMQ3LIE5 342 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 OR4C11Q6IEV9 310 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 CYP2R1Q6VVX0 501 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 ZNF583Q96ND8 569 aa19.21■□□□□ 0.67
TRIO-223ENST00000515710 CPPED1Q9BRF8 314 aaPredicted RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 SORBS1Q9BX66 1292 aaKnown RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 DDX31Q9H8H2 851 aaKnown RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 C6orf203Q9P0P8 240 aaPredicted RBP19.21■□□□□ 0.67
TRIO-223ENST00000515710 GSAPA4D1B5 854 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 RNASET2O00584 256 aaKnown RBP19.2■□□□□ 0.66
TRIO-223ENST00000515710 ARPC2O15144 300 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 VILLO15195 856 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 DDX5P17844 614 aaKnown RBP19.2■□□□□ 0.66
TRIO-223ENST00000515710 CDKN2CP42773 168 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 MAPK12P53778 367 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 HNRNPKP61978 463 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRIO-223ENST00000515710 TRA2BP62995 288 aaKnown RBP19.2■□□□□ 0.66
TRIO-223ENST00000515710 SLC5A12Q1EHB4 618 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 IRAK1BP1Q5VVH5 260 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 ANKRD26P1Q6NSI1 321 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 DNAJC14Q6Y2X3 702 aaPredicted RBP19.2■□□□□ 0.66
TRIO-223ENST00000515710 UBE3DQ7Z6J8 389 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 SRFBP1Q8NEF9 429 aaKnown RBP19.2■□□□□ 0.66
TRIO-223ENST00000515710 OR10G6Q8NH81 332 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 LMX1AQ8TE12 382 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 PPCDCQ96CD2 204 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 DOLKQ9UPQ8 538 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 PRUNE2Q8WUY3 3088 aa19.2■□□□□ 0.66
TRIO-223ENST00000515710 OR2A25A4D2G3 310 aa19.19■□□□□ 0.66
TRIO-223ENST00000515710 RTCAO00442 366 aaKnown RBP19.19■□□□□ 0.66
TRIO-223ENST00000515710 TBX19O60806 448 aa19.19■□□□□ 0.66
TRIO-223ENST00000515710 IL3P08700 152 aa19.19■□□□□ 0.66
TRIO-223ENST00000515710 ZCCHC18P0CG32 403 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms