RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 GNAZP19086 355 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 EPORP19235 508 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 CD22P20273 847 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 UQCRFS1P47985 274 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 BTN3A2P78410 334 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 BTG2P78543 158 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 RGS1Q08116 209 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 PWP1Q13610 501 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 DOC2AQ14183 400 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 PCOLCEQ15113 449 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 INPP5JQ15735 1006 aaPredicted RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 FAM153CQ494X1 144 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 XKR6Q5GH73 641 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 AGAP7PQ5VUJ5 663 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 B3GNTL1Q67FW5 361 aaPredicted RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 SULT1C3Q6IMI6 304 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.85□□□□□ -0.67
VCAN-212ENST00000515397 PLD6Q8N2A8 252 aaKnown RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 RNF175Q8N4F7 328 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 ZADH2Q8N4Q0 377 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 AFAP1L2Q8N4X5 818 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 TBC1D19Q8N5T2 526 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 STAG3L4Q8TBR4 150 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 NT5CQ8TCD5 201 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 MIB2Q96AX9 1013 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 NACC2Q96BF6 587 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 CNDP1Q96KN2 507 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 AGAP4Q96P64 663 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 SARGQ9BW04 601 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 LHPPQ9H008 270 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 VPS11Q9H270 941 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 NMRAL1Q9HBL8 299 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 PRM3Q9NNZ6 103 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 ZNF490Q9ULM2 529 aaPredicted RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 SLC22A7Q9Y694 548 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 UBR5O95071 2799 aaPredicted RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 A0A096LPK6 155 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 MYOCOSA0A1B0GUC4 107 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 A8MUI8 341 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 KIF2AO00139 706 aaPredicted RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 GALR3O60755 368 aaPredicted RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 SORBS2O94875 1100 aaKnown RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 TBX6O95947 436 aaPredicted RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 ALDOAP04075 364 aaKnown RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 S100BP04271 92 aaPredicted RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 ALPPP05187 535 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 TYK2P29597 1187 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 HNRNPH1P31943 449 aaKnown RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 PHBP35232 272 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 AHRP35869 848 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 GGT5P36269 586 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 PLA2G16P53816 162 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 SOX8P57073 446 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 NAB1Q13506 487 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 HERC3Q15034 1050 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 NSDHLQ15738 373 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 PFKFB4Q16877 469 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 IRAK1BP1Q5VVH5 260 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 FCRLBQ6BAA4 426 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 TMEM205Q6UW68 189 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 TMIGD1Q6UXZ0 262 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 VN1R5Q7Z5H4 357 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 ANKRD37Q7Z713 158 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 CUZD1Q86UP6 607 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 KBTBD2Q8IY47 623 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
VCAN-212ENST00000515397 KLHDC8AQ8IYD2 350 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 TRPV3Q8NET8 790 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 DNAJB14Q8TBM8 379 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 METTL21AQ8WXB1 218 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 PSMF1Q92530 271 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 ATOH8Q96SQ7 321 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 SLC6A16Q9GZN6 736 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 ACSS3Q9H6R3 686 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 LANCL2Q9NS86 450 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 C5AR2Q9P296 337 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 LRRK2Q5S007 2527 aa10.84□□□□□ -0.67
VCAN-212ENST00000515397 A8MUA0 341 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 TUBB4AP04350 444 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 UQCRHP07919 91 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 SERPINA6P08185 405 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 INHBAP08476 426 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 SMIM10L1P0DMW3 83 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 MTHFD2P13995 350 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 GNLYP22749 145 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 RHAGQ02094 409 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 IRF8Q02556 426 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 CHIT1Q13231 466 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 RUNX2Q13950 521 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 ABRAXAS2Q15018 415 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 PDK4Q16654 411 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 GLE1Q53GS7 698 aaKnown RBP10.83□□□□□ -0.68
VCAN-212ENST00000515397 FAM219BQ5XKK7 198 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 ABHD13Q7L211 337 aa10.83□□□□□ -0.68
VCAN-212ENST00000515397 CPEB2Q7Z5Q1 589 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms