RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TOR1AIP1Q5JTV8 583 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 PWWP2BQ6NUJ5 590 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 ABHD13Q7L211 337 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 MTERF4Q7Z6M4 381 aaKnown RBP19.97■□□□□ 0.79
LSM6-207ENST00000515311 TMEM126BQ8IUX1 230 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 DDIASQ8IXT1 998 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 SRFBP1Q8NEF9 429 aaKnown RBP19.97■□□□□ 0.79
LSM6-207ENST00000515311 OR2L5Q8NG80 312 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 C19orf60Q96EN9 201 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 NDC1Q9BTX1 674 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 REXO4Q9GZR2 422 aaKnown RBP19.97■□□□□ 0.79
LSM6-207ENST00000515311 AICDAQ9GZX7 198 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 OR51B5Q9H339 312 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 VPS29Q9UBQ0 182 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 MARCOQ9UEW3 520 aaPredicted RBP19.97■□□□□ 0.79
LSM6-207ENST00000515311 SLC12A4Q9UP95 1085 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 CCL27Q9Y4X3 112 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 TRPC5OSA6NMA1 111 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 NPIPB8E9PQR5 432 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 ZNF749O43361 778 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 RGS14O43566 566 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 SKAP2O75563 359 aaPredicted RBP19.96■□□□□ 0.79
LSM6-207ENST00000515311 SCRG1O75711 98 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 TGDSO95455 350 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 ETHE1O95571 254 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 HBQ1P09105 142 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 LINC00032P0C843 101 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 KITP10721 976 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 PRPH2P23942 346 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 LSP1P33241 339 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 BTKQ06187 659 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 TGM3Q08188 693 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 FAM53BQ14153 422 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 PDCD2Q16342 344 aaPredicted RBP19.96■□□□□ 0.79
LSM6-207ENST00000515311 MUM1Q2TAK8 710 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 TMEM164Q5U3C3 297 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 IGF2-ASQ6U949 168 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 SCIMPQ6UWF3 145 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 MARCH9Q86YJ5 346 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 WDR75Q8IWA0 830 aaKnown RBP19.96■□□□□ 0.79
LSM6-207ENST00000515311 C10orf90Q96M02 699 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 F2RL3Q96RI0 385 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 CTRCQ99895 268 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 NRSN2Q9GZP1 204 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 KLHL31Q9H511 634 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 PTGDR2Q9Y5Y4 395 aa19.96■□□□□ 0.79
LSM6-207ENST00000515311 RSL1D1O76021 490 aaKnown RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 TIAF1O95411 115 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 JUNP05412 331 aaKnown RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 SMIM10L1P0DMW3 83 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 ALOX15P16050 662 aaPredicted RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 TSFMP43897 325 aaKnown RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 GABREP78334 506 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 FOXC1Q12948 553 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 HERC3Q15034 1050 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 IMPG1Q17R60 797 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 RHBDD2Q6NTF9 364 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 NIPAL1Q6NVV3 410 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 TRIM40Q6P9F5 258 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 FOXR1Q6PIV2 292 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 DGLUCYQ7Z3D6 616 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 UTP15Q8TED0 518 aaKnown RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 RGMAQ96B86 450 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 MVB12AQ96EY5 273 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 CHMP6Q96FZ7 201 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 SMIM10Q96HG1 83 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 METTL2AQ96IZ6 378 aaKnown RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 KCNC2Q96PR1 638 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 ACTR5Q9H9F9 607 aaPredicted RBP19.95■□□□□ 0.78
LSM6-207ENST00000515311 MEAF6Q9HAF1 191 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 CUTCQ9NTM9 273 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 FGFR1OP2Q9NVK5 253 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 RIC8BQ9NVN3 520 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 WASF3Q9UPY6 502 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 B3GALT1Q9Y5Z6 326 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 USH1CQ9Y6N9 552 aa19.95■□□□□ 0.78
LSM6-207ENST00000515311 ZNF195O14628 629 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 DSCR3O14972 297 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 ERI3O43414 337 aaKnown RBP19.94■□□□□ 0.78
LSM6-207ENST00000515311 TNFSF15O95150 251 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 ZNF888P0CJ79 500 aaPredicted RBP19.94■□□□□ 0.78
LSM6-207ENST00000515311 ALOX12P18054 663 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 RAP1GDS1P52306 607 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 SKP1P63208 163 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 GNGT1P63211 74 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 HMGCS1Q01581 520 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 CAMK2BQ13554 666 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 ABHD17CQ6PCB6 329 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 LRRC34Q8IZ02 419 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 OR2T11Q8NH01 316 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 ZCCHC10Q8TBK6 192 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 PMEPA1Q969W9 287 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 SIKE1Q9BRV8 207 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 TBCDQ9BTW9 1192 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 NUF2Q9BZD4 464 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 ROGDIQ9GZN7 287 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 AHSPQ9NZD4 102 aa19.94■□□□□ 0.78
LSM6-207ENST00000515311 MRPS2Q9Y399 296 aaKnown RBP19.94■□□□□ 0.78
LSM6-207ENST00000515311 A0A088AWK7 358 aa19.93■□□□□ 0.78
LSM6-207ENST00000515311 A0A1B0GX78 115 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms