RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SULT1C3Q6IMI6 304 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 SLCO4C1Q6ZQN7 724 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 CMC1Q7Z7K0 106 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 CTAGE6Q86UF2 777 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 UTP15Q8TED0 518 aaKnown RBP23.11■■□□□ 1.29
SNF8-213ENST00000514929 PSMF1Q92530 271 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 EXT2Q93063 718 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 KIAA1191Q96A73 305 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 IMMP1LQ96LU5 166 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 TMEM79Q9BSE2 394 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 SLC6A16Q9GZN6 736 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 DNAJC11Q9NVH1 559 aa23.11■■□□□ 1.29
SNF8-213ENST00000514929 PRRC2CQ9Y520 2896 aaKnown RBP23.1■■□□□ 1.29
SNF8-213ENST00000514929 CLEC18AA5D8T8 446 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 TCP11X1B4DZS4 312 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 CHST10O43529 356 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 CRABP2P29373 138 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 GGT5P36269 586 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 HSPA7P48741 367 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 SLBPQ14493 270 aaKnown RBP eCLIP23.1■■□□□ 1.29
SNF8-213ENST00000514929 ZNF169Q14929 603 aaPredicted RBP23.1■■□□□ 1.29
SNF8-213ENST00000514929 TLR1Q15399 786 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 FBXO48Q5FWF7 155 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 CLEC18BQ6UXF7 455 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 TMIGD1Q6UXZ0 262 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 ANKRD37Q7Z713 158 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 TBC1D1Q86TI0 1168 aaPredicted RBP23.1■■□□□ 1.29
SNF8-213ENST00000514929 CLEC18CQ8NCF0 446 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 TBC1D20Q96BZ9 403 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 MRRFQ96E11 262 aaKnown RBP23.1■■□□□ 1.29
SNF8-213ENST00000514929 GPRC5BQ9NZH0 403 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 MTRF1LQ9UGC7 380 aaKnown RBP23.1■■□□□ 1.29
SNF8-213ENST00000514929 SHANK1Q9Y566 2161 aa23.1■■□□□ 1.29
SNF8-213ENST00000514929 DYTNA2CJ06 578 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 CLGNO14967 610 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 STK16O75716 305 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 FHP07954 510 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 SERPINA6P08185 405 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 SLC35E2BP0CK96 405 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 ITGAMP11215 1152 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 PHBP35232 272 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 SOX11P35716 441 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 GMPRP36959 345 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 ARG2P78540 354 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 NSDHLQ15738 373 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 TOR1AIP1Q5JTV8 583 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 CEP128Q6ZU80 1094 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNF8-213ENST00000514929 KRT78Q8N1N4 520 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 MMGT1Q8N4V1 131 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 SNX31Q8N9S9 440 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 PDPRQ8NCN5 879 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 MNS1Q8NEH6 495 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 TTLQ8NG68 377 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 CREB3L4Q8TEY5 395 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 ESAMQ96AP7 390 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 KLHL31Q9H511 634 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 ALG9Q9H6U8 611 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 NMRAL1Q9HBL8 299 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 LANCL2Q9NS86 450 aa23.09■■□□□ 1.29
SNF8-213ENST00000514929 DNAJB6O75190 326 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 TFEBP19484 476 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 JAK1P23458 1154 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 STXBP1P61764 594 aaKnown RBP23.08■■□□□ 1.29
SNF8-213ENST00000514929 RHAGQ02094 409 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 SRSF1Q07955 248 aaKnown RBP eCLIP23.08■■□□□ 1.299e-7■■■■□ 24.1
SNF8-213ENST00000514929 HYAL2Q12891 473 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 MRPL49Q13405 166 aaKnown RBP23.08■■□□□ 1.29
SNF8-213ENST00000514929 ABRAXAS2Q15018 415 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 BTBD16Q32M84 506 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 B3GNTL1Q67FW5 361 aaPredicted RBP23.08■■□□□ 1.29
SNF8-213ENST00000514929 PLPP5Q8NEB5 264 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 STAG3L4Q8TBR4 150 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 CCT6BQ92526 530 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 CLK4Q9HAZ1 481 aaKnown RBP23.08■■□□□ 1.29
SNF8-213ENST00000514929 AGPAT4Q9NRZ5 378 aa23.08■■□□□ 1.29
SNF8-213ENST00000514929 MAGEB17A8MXT2 336 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 LTA4HP09960 611 aaKnown RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 TSFMP43897 325 aaKnown RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 ACTN3Q08043 901 aaPredicted RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 NR6A1Q15406 480 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 UAP1Q16222 522 aaPredicted RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 PDK4Q16654 411 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 FHL5Q5TD97 284 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 PLAG1Q6DJT9 500 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 AMER2Q8N7J2 671 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 NOA1Q8NC60 698 aaKnown RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 CATSPER1Q8NEC5 780 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 PLA2G3Q9NZ20 509 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 TEKT2Q9UIF3 430 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 PTBP2Q9UKA9 531 aaKnown RBP23.07■■□□□ 1.28
SNF8-213ENST00000514929 NTNG1Q9Y2I2 539 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 ACOT9Q9Y305 439 aa23.07■■□□□ 1.28
SNF8-213ENST00000514929 ANKDD1BA6NHY2 528 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 PSMD12O00232 456 aaPredicted RBP23.06■■□□□ 1.28
SNF8-213ENST00000514929 CCNT2O60583 730 aaKnown RBP23.06■■□□□ 1.28
SNF8-213ENST00000514929 B4GALT2O60909 372 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 SMIM10L1P0DMW3 83 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 GSTM2P28161 218 aa23.06■■□□□ 1.28
SNF8-213ENST00000514929 DLG1Q12959 904 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms