RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	UGCG	Q16739	394 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	EIPR1	Q53HC9	387 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	MFSD4B	Q5TF39	518 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	OLFML2A	Q68BL7	652 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	NRARP	Q7Z6K4	114 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	OR4N5	Q8IXE1	308 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	ANKRD13C	Q8N6S4	541 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	C4orf32	Q8N8J7	132 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	PAPOLG	Q9BWT3	736 aa	Known RBP	3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	GTPBP2	Q9BX10	602 aa	Known RBP	3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	RBM24	Q9BX46	236 aa	Known RBP	3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	ADNP	Q9H2P0	1102 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	TTLL3	Q9Y4R7	772 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	CCL27	Q9Y4X3	112 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	LIPG	Q9Y5X9	500 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	COLEC10	Q9Y6Z7	277 aa		3.23	□□□□□ -1.89
MATR3-223	ENST00000514402	HCFC1	P51610	2035 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	RPGRIP1L	Q68CZ1	1315 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	SPATA31D1	Q6ZQQ2	1576 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402		A0A1W2PRQ8	180 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	TCP10L2	B9ZVM9	353 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	PHOX2A	O14813	284 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	C9	P02748	559 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	MELTF	P08582	738 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	CCDC175	P0C221	793 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	STAG3L1	P0CL83	205 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	RIDA	P52758	137 aa	Known RBP	3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	HYAL4	Q2M3T9	481 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	FAM133B	Q5BKY9	247 aa	Known RBP	3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	SPANXN4	Q5MJ08	99 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	C6orf136	Q5SQH8	315 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	SLC30A6	Q6NXT4	461 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	C11orf57	Q6ZUT1	292 aa	Predicted RBP	3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	TIPARP	Q7Z3E1	657 aa	Known RBP	3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	CCDC186	Q7Z3E2	898 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	CREBRF	Q8IUR6	639 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	NXPE2	Q96DL1	559 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	RBM41	Q96IZ5	413 aa	Known RBP	3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	NEDD4L	Q96PU5	975 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	KRTAP4-3	Q9BYR4	195 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	TXLNGY	Q9BZA5	131 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	NKIRAS2	Q9NYR9	191 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	ZNF581	Q9P0T4	197 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	SNX7	Q9UNH6	387 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	STYXL1	Q9Y6J8	313 aa		3.22	□□□□□ -1.89
MATR3-223	ENST00000514402	NPIPA3	F8WFD2	350 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	PDHX	O00330	501 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	INPP4B	O15327	924 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	MAGEB2	O15479	319 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	SH3BGRL	O75368	114 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ADORA3	P0DMS8	318 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	SPP1	P10451	314 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	KRT3	P12035	628 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	SELE	P16581	610 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	DUT	P33316	252 aa	Known RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ATP4B	P51164	291 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	CRYBA2	P53672	197 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	NDUFV3	P56181	108 aa	Known RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ABCE1	P61221	599 aa	Known RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	GCKR	Q14397	625 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	RASA2	Q15283	850 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	MLF2	Q15773	248 aa	Predicted RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	C3AR1	Q16581	482 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	RNLS	Q5VYX0	342 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	VIT	Q6UXI7	678 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ERN2	Q76MJ5	926 aa	Known RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ABI3BP	Q7Z7G0	1075 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	KCNMB4	Q86W47	210 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	CARM1	Q86X55	608 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	TEX26	Q8N6G2	289 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	SSC4D	Q8WTU2	575 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	AK8	Q96MA6	479 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	C10orf88	Q9H8K7	445 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	MOB1A	Q9H8S9	216 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ANKEF1	Q9NU02	776 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF107	Q9UII5	783 aa	Predicted RBP	3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	PILRA	Q9UKJ1	303 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	POMT2	Q9UKY4	750 aa		3.21	□□□□□ -1.9
MATR3-223	ENST00000514402	NEDD4	P46934	1319 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	TRAV18	A0A075B6X5	111 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402		A0A087WV48	116 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402		A0A087WWV3	80 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	ZNF840P	A6NDX5	716 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	URAD	A6NGE7	173 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	TBX10	O75333	385 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	FCGR2B	P31994	310 aa	Predicted RBP	3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	FCGR2C	P31995	323 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	KRT20	P35900	424 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	KRTAP12-2	P59991	146 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	MZT1	Q08AG7	82 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	PPA1	Q15181	289 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	LRRC73	Q5JTD7	316 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	AGAP7P	Q5VUJ5	663 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	FAM166A	Q6J272	317 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	DHRS11	Q6UWP2	260 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	GET4	Q7L5D6	327 aa	Predicted RBP	3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	COX8C	Q7Z4L0	72 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	PHLDB2	Q86SQ0	1253 aa		3.2	□□□□□ -1.9
MATR3-223	ENST00000514402	DND1	Q8IYX4	353 aa	Known RBP	3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms