RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FGF4P08620 206 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 KCNE1P15382 129 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ENDOUP21128 410 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CPN2P22792 545 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 KDELR2P33947 212 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SPHARQ15513 63 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 KANK2Q63ZY3 851 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 B3GNT9Q6UX72 402 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 OR10G6Q8NH81 332 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 XAGE5Q8WWM1 108 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 GTF2H4Q92759 462 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 C16orf70Q9BSU1 422 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 TPT1P8Q9HAU6 139 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 DNAJC27Q9NZQ0 273 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 MAGED1Q9Y5V3 778 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 COL2A1P02458 1487 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 MYO5AQ9Y4I1 1855 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 A0A096LPI6 279 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 A0A1W2PRU2 124 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 A6NL46 340 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 PITPNM1O00562 1244 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 DCLK1O15075 740 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 IDUAP35475 653 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 DGKGP49619 791 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CCR4P51679 360 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 WNT7BP56706 349 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 NFE2L1Q14494 772 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CDK10Q15131 360 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 GALNT11Q8NCW6 608 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SLC29A3Q9BZD2 475 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 STOX2Q9P2F5 926 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 TEX51A0A1B0GUA7 166 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 LRRC14BA6NHZ5 514 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ATG13O75143 517 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ALPLP05186 524 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CKMT1AP12532 417 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 AGTR2P50052 363 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 STC1P52823 247 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FGFBP1Q14512 234 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 PTGR1Q14914 329 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 TAZQ16635 292 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CRB2Q5IJ48 1285 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 LINGO2Q7L985 606 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FAM220AQ7Z4H9 259 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 HS3ST5Q8IZT8 346 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 OR14C36Q8NHC7 312 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 TMEM174Q8WUU8 243 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 AUTS2Q8WXX7 1259 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 RERGQ96A58 199 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 RFT1Q96AA3 541 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FUZQ9BT04 418 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 GSTO2Q9H4Y5 243 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 YIPF1Q9Y548 306 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 PCDHB14Q9Y5E9 798 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 MYH14Q7Z406 1995 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 MANBAO00462 879 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SLC19A2O60779 497 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 RPS24P62847 133 aaKnown RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 EFR3AQ14156 821 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 CBX2Q14781 532 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 VMACQ2NL98 169 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF691Q5VV52 312 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 LIPKQ5VXJ0 399 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SERPINA9Q86WD7 417 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SLC30A8Q8IWU4 369 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 PJA1Q8NG27 643 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 SAV1Q9H4B6 383 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 ACOT13Q9NPJ3 140 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 GPR83Q9NYM4 423 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 RFPL3O75679 317 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 GABARAPO95166 117 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 ERVK-21P61565 698 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 SLC10A7Q0GE19 358 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 ZBTB6Q15916 424 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 NCEH1Q6PIU2 408 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 C17orf64Q86WR6 236 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 GKN1Q9NS71 199 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 EXTL2Q9UBQ6 330 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 MGAT4AQ9UM21 535 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 STUB1Q9UNE7 303 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 TLR6Q9Y2C9 796 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 KCTD3Q9Y597 815 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 TLX2O43763 284 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-211ENST00000513346 HCN1O60741 890 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 RETP07949 1114 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 RPS5P46782 204 aaKnown RBP10.87□□□□□ -0.67
TCOF1-211ENST00000513346 CAPN13Q6MZZ7 669 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-211ENST00000513346 MAMDC4Q6UXC1 1216 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 GDPGP1Q6ZNW5 385 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 PHYKPLQ8IUZ5 450 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
TCOF1-211ENST00000513346 TRIB2Q92519 343 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms