RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PRSS41Q7RTY9 318 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 CAMKMTQ7Z624 323 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 CCDC71Q8IV32 467 aaPredicted RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 MAGOHBQ96A72 148 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 MBD6Q96DN6 1003 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 OR1F2PQ96R84 312 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 FN1P02751 2386 aaKnown RBP13.04□□□□□ -0.32
SPCS3-204ENST00000513139 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
SPCS3-204ENST00000513139 E7ENX8 843 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 HS6ST1O60243 411 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 ZSCAN5DPP0CG00 497 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 HRH2P25021 359 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 ITGA8P53708 1063 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 NUP107P57740 925 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 OR4D2P58180 307 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 MLF1P58340 268 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 RPS15AP62244 130 aaKnown RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 TAP2Q03519 686 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 TSTA3Q13630 321 aaPredicted RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 TMEM214Q6NUQ4 689 aaKnown RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 PAOXQ6QHF9 649 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 SULF2Q8IWU5 870 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 ZFP62Q8NB50 900 aaPredicted RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 RMND5BQ96G75 393 aaPredicted RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 ANKHQ9HCJ1 492 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 DRG1Q9Y295 367 aaKnown RBP13.03□□□□□ -0.32
SPCS3-204ENST00000513139 TCAF1Q9Y4C2 921 aa13.03□□□□□ -0.32
SPCS3-204ENST00000513139 SGK494L7N484 410 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 FCHO1O14526 889 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 PROM1O43490 865 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 NDUFS3O75489 264 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 SLC16A8O95907 504 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 IFNB1P01574 187 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 CATP04040 527 aaKnown RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 IL1RNP18510 177 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 COILP38432 576 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 MEF2AQ02078 507 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 PPP1R21Q6ZMI0 780 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 VN1R4Q7Z5H5 301 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 PLD3Q8IV08 490 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 SHISA5Q8N114 240 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 RPRMLQ8N4K4 120 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 FBXO15Q8NCQ5 510 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 ZNF480Q8WV37 535 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 TM4SF19Q96DZ7 209 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 BIRC8Q96P09 236 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 PKP4Q99569 1192 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 CLEC4MQ9H2X3 399 aaPredicted RBP13.02□□□□□ -0.33
SPCS3-204ENST00000513139 LIME1Q9H400 295 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 LANCL2Q9NS86 450 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 TMEM184CQ9NVA4 438 aa13.02□□□□□ -0.33
SPCS3-204ENST00000513139 H3BMM5 538 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 H7BY64 318 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 PEX1O43933 1283 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 STIP1P31948 543 aaKnown RBP13.01□□□□□ -0.33
SPCS3-204ENST00000513139 PEX19P40855 299 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 PAFAH1B1P43034 410 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 EIF3BP55884 814 aaKnown RBP13.01□□□□□ -0.33
SPCS3-204ENST00000513139 DLX5P56178 289 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 CYP1B1Q16678 543 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 CTSL3PQ5NE16 218 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 ARSKQ6UWY0 536 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 GSTA5Q7RTV2 222 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 CAMKVQ8NCB2 501 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 PPHLN1Q8NEY8 458 aaKnown RBP13.01□□□□□ -0.33
SPCS3-204ENST00000513139 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 PRAP1Q96NZ9 151 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
SPCS3-204ENST00000513139 SLC22A7Q9Y694 548 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 TLN2Q9Y4G6 2542 aa13.01□□□□□ -0.33
SPCS3-204ENST00000513139 GOLGA6L10A0A0M3HER8 536 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 OR14I1A6ND48 311 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 TUBB4AP04350 444 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 ACVR2AP27037 513 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 RPL22P35268 128 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 FDFT1P37268 417 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 RFC3P40938 356 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 GRIA1P42261 906 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 ZFP36L2P47974 494 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 DGKQP52824 942 aa13□□□□□ -0.33
SPCS3-204ENST00000513139 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
SPCS3-204ENST00000513139 TRIP13Q15645 432 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms