RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PKP4Q99569 1192 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 SLX1AQ9BQ83 275 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 TUBB6Q9BUF5 446 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 RNF32Q9H0A6 362 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP46-208ENST00000512656 ZNF700Q9H0M5 742 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 PCBD2Q9H0N5 130 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 XAB2Q9HCS7 855 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 PRDM7Q9NQW5 492 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 C19orf25Q9UFG5 118 aaPredicted RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 TAC3Q9UHF0 121 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 PCYOX1Q9UHG3 505 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 ENTPD4Q9Y227 616 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 RUVBL1Q9Y265 456 aaKnown RBP6.81□□□□□ -1.32
USP46-208ENST00000512656 COMMD10Q9Y6G5 202 aa6.81□□□□□ -1.32
USP46-208ENST00000512656 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 LOC102723996A0A087X1L8 192 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 IGHV1-45A0A0A0MS14 117 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 FAM237BA0A1B0GVD1 139 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 KRT87PA6NCN2 255 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 SDR42E2A6NKP2 422 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 E7ENX8 843 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 EIF3FO00303 357 aaPredicted RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 NRDCO43847 1150 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 CEP104O60308 925 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 SLC16A8O95907 504 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 CCDC175P0C221 793 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 MPC1LP0DKB6 136 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 C8orf89P0DMQ9 161 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 GDNFP39905 211 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 MAGEA6P43360 314 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 KCNJ1P48048 391 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 RPS15AP62244 130 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 TAP2Q03519 686 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 RBPJQ06330 500 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 GPS1Q13098 491 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 DHX34Q14147 1143 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 HKDC1Q2TB90 917 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 ACSBG2Q5FVE4 666 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 ZNF470Q6ECI4 717 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 FAAH2Q6GMR7 532 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 ZNF425Q6IV72 752 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 LRRC8EQ6NSJ5 796 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 TMEM205Q6UW68 189 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 TMEM207Q6UWW9 146 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 GFRALQ6UXV0 394 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 ZNF662Q6ZS27 426 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 CENPUQ71F23 418 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 TICAM1Q8IUC6 712 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 REXO1L1PQ8IX06 675 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 MRPL41Q8IXM3 137 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 PALM2Q8IXS6 379 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 SIRT6Q8N6T7 355 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 CCDC168Q8NDH2 2452 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 CATSPER1Q8NEC5 780 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 DNAJB8Q8NHS0 232 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 CALML6Q8TD86 181 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 BRIX1Q8TDN6 353 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 NR4A3Q92570 626 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 KCNJ9Q92806 393 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 OR2A5Q96R48 311 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 FAM129AQ9BZQ8 928 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 TMEM184CQ9NVA4 438 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 ABI3Q9P2A4 366 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 STOX2Q9P2F5 926 aaPredicted RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 ZGRF1Q86YA3 2104 aa6.8□□□□□ -1.32
USP46-208ENST00000512656 ANKRD17O75179 2603 aaKnown RBP6.8□□□□□ -1.32
USP46-208ENST00000512656 NUP210LQ5VU65 1888 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 A0A0A6YYC8 382 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 IGKV1-8A0A0C4DH67 115 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 OR5H15A6NDH6 313 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 PABPN1LA6NDY0 278 aaKnown RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 ZNF503-AS2A6NEH8 195 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 H0YIG0 161 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 H7BY64 318 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 I3L1I5 382 aaPredicted RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 GFYI3L273 518 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 HAT1O14929 419 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 FOXS1O43638 330 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 KIF5CO60282 957 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 NRP2O60462 931 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 ZG16O60844 167 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 AVILO75366 819 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 RASAL1O95294 804 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 NSA2O95478 260 aaKnown RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 MLYCDO95822 493 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 KRT14P02533 472 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 GRK3P35626 688 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 SKIV2L2P42285 1042 aaKnown RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 VPS41P49754 854 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 RGS4P49798 205 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 CASP6P55212 293 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 SKP1P63208 163 aa6.79□□□□□ -1.32
USP46-208ENST00000512656 YBX1P67809 324 aaKnown RBP6.79□□□□□ -1.32
USP46-208ENST00000512656 ART3Q13508 389 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms