RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KBTBD2Q8IY47 623 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 CENPLQ8N0S6 344 aaPredicted RBP12.54□□□□□ -0.4
RNF4-215ENST00000511843 ZADH2Q8N4Q0 377 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 PDPRQ8NCN5 879 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 CREB3L4Q8TEY5 395 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 CCT6BQ92526 530 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 TSLPQ969D9 159 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 VPS50Q96JG6 964 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 ATOH8Q96SQ7 321 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 CYTH2Q99418 400 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 FMO2Q99518 471 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 FAM129AQ9BZQ8 928 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
RNF4-215ENST00000511843 ACSS3Q9H6R3 686 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 SNX15Q9NRS6 342 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 DNAJC11Q9NVH1 559 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 PTGFRNQ9P2B2 879 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 PTBP2Q9UKA9 531 aaKnown RBP12.54□□□□□ -0.4
RNF4-215ENST00000511843 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 FLNCQ14315 2725 aa12.54□□□□□ -0.4
RNF4-215ENST00000511843 LOC102723996A0A087X1L8 192 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 FAM227AF5H4B4 570 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CHST10O43529 356 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 STK16O75716 305 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 C2P06681 752 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 LTA4HP09960 611 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 EPORP19235 508 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 GNLYP22749 145 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CRABP2P29373 138 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 ST13P50502 369 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 RHAGQ02094 409 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 PDK4Q16654 411 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 VN1R5Q7Z5H4 357 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CPEB2Q7Z5Q1 589 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 HPS6Q86YV9 775 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 TCAIMQ8N3R3 496 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CISD2Q8N5K1 135 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CATSPER1Q8NEC5 780 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 TRPV3Q8NET8 790 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 METTL21AQ8WXB1 218 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 PSMF1Q92530 271 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 MAGEB10Q96LZ2 347 aaPredicted RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 ZNF700Q9H0M5 742 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 RHBGQ9H310 441 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 CNOT10Q9H9A5 744 aaKnown RBP12.53□□□□□ -0.4
RNF4-215ENST00000511843 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 LANCL2Q9NS86 450 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 RIC8BQ9NVN3 520 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 PLA2G3Q9NZ20 509 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
RNF4-215ENST00000511843 ESPL1Q14674 2120 aa12.52□□□□□ -0.4
RNF4-215ENST00000511843 DOPEY2Q9Y3R5 2298 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 A0A1W2PQ72 361 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 LRRC14BA6NHZ5 514 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 CLGNO14967 610 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 B4GALT2O60909 372 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 H2AFYO75367 372 aaKnown RBP12.52□□□□□ -0.41
RNF4-215ENST00000511843 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
RNF4-215ENST00000511843 SERPINA7P05543 415 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 UQCRHP07919 91 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 PHBP35232 272 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 GGT5P36269 586 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 BTN3A2P78410 334 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 SRSF1Q07955 248 aaKnown RBP eCLIP12.52□□□□□ -0.414e-6■□□□□ 8.1
RNF4-215ENST00000511843 DOC2AQ14183 400 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 XKR6Q5GH73 641 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 Q6ZS92 163 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ANKRD37Q7Z713 158 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ATCAYQ86WG3 371 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 STAG3L4Q8TBR4 150 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 TM9SF4Q92544 642 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 SNRNP40Q96DI7 357 aaKnown RBP12.52□□□□□ -0.41
RNF4-215ENST00000511843 TRIM44Q96DX7 344 aaPredicted RBP12.52□□□□□ -0.41
RNF4-215ENST00000511843 IMMP1LQ96LU5 166 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 WDR77Q9BQA1 342 aaPredicted RBP12.52□□□□□ -0.41
RNF4-215ENST00000511843 CD244Q9BZW8 370 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 VPS11Q9H270 941 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ASF1BQ9NVP2 202 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 NUDT4Q9NZJ9 180 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 NTNG1Q9Y2I2 539 aa12.52□□□□□ -0.41
RNF4-215ENST00000511843 ASH1LQ9NR48 2969 aaKnown RBP12.51□□□□□ -0.41
RNF4-215ENST00000511843 A0A087X1B8 175 aa12.51□□□□□ -0.41
RNF4-215ENST00000511843 A0A096LPK6 155 aa12.51□□□□□ -0.41
RNF4-215ENST00000511843 POC1B-GALNT4F8VUJ3 575 aa12.51□□□□□ -0.41
RNF4-215ENST00000511843 KIF2AO00139 706 aaPredicted RBP12.51□□□□□ -0.41
RNF4-215ENST00000511843 ERI3O43414 337 aaKnown RBP12.51□□□□□ -0.41
RNF4-215ENST00000511843 KLHL41O60662 606 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms