RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PRTGQ2VWP7 1150 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 UNC50Q53HI1 259 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TTMPQ5BVD1 217 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 DCAF10Q5QP82 559 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 LRIG3Q6UXM1 1119 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 FRA10AC1Q70Z53 315 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 COX15Q7KZN9 410 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 PRSS41Q7RTY9 318 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 GOLGA7Q7Z5G4 137 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 PPP1R32Q7Z5V6 425 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TMPRSS11BQ86T26 416 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 ATCAYQ86WG3 371 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 C17orf64Q86WR6 236 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 GALNT16Q8N428 558 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TBC1D19Q8N5T2 526 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 OR52B6Q8NGF0 335 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 STT3BQ8TCJ2 826 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TM9SF4Q92544 642 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TLCD1Q96CP7 247 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TM4SF19Q96DZ7 209 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 APOPT1Q96IL0 206 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 MRPL57Q9BQC6 102 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 HAUS8Q9BT25 410 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 MECRQ9BV79 373 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 NUDT9Q9BW91 350 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC26A1Q9H2B4 701 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 MRPL46Q9H2W6 279 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TMBIM4Q9HC24 238 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 TMEM184CQ9NVA4 438 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 WWOXQ9NZC7 414 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 CD274Q9NZQ7 290 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 C3orf18Q9UK00 162 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 FBXL4Q9UKA2 621 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF490Q9ULM2 529 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 RUVBL1Q9Y265 456 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 PCDHGB7Q9Y5F8 929 aa8.3□□□□□ -1.08
PDLIM5-213ENST00000509357 A0A0A6YYC8 382 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 I3L1I5 382 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 MASP2O00187 686 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 FFAR3O14843 346 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 GPR42O15529 346 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 FOXS1O43638 330 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CCNT2O60583 730 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 VPS4BO75351 444 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CEACAM4O75871 244 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 WFS1O76024 890 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 IPO13O94829 963 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 ONECUT2O95948 504 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 SERPIND1P05546 499 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TUBBP07437 444 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 HEXBP07686 556 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 EEF1DP29692 281 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 HNMTP50135 292 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CCR8P51685 355 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 EMP2P54851 167 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 EMP3P54852 163 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 ALDH18A1P54886 795 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CDH13P55290 713 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 RPS15AP62244 130 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 RELAQ04206 551 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 KLC1Q07866 573 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 IFFO1Q0D2I5 559 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CDC16Q13042 620 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TRAF3Q13114 568 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 AIMP2Q13155 320 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 DOC2AQ14183 400 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TUBB8Q3ZCM7 444 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 NADK2Q4G0N4 442 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 VWA2Q5GFL6 755 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CDKL4Q5MAI5 379 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 MFSD4BQ5TF39 518 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 VWA5B1Q5TIE3 1220 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 GARNL3Q5VVW2 1013 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 FAAH2Q6GMR7 532 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 NXPE4Q6UWF7 544 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TAOK1Q7L7X3 1001 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CCDC91Q7Z6B0 441 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 PDSS2Q86YH6 399 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 HPS6Q86YV9 775 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 PARP9Q8IXQ6 854 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CAMKVQ8NCB2 501 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 OR6Y1Q8NGX8 325 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 TCP10LQ8TDR4 215 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF483Q8TF39 744 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 NACC2Q96BF6 587 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 MVB12AQ96EY5 273 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 SCYL1Q96KG9 808 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 SPSB2Q99619 263 aa8.29□□□□□ -1.08
PDLIM5-213ENST00000509357 CCDC77Q9BR77 488 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms