RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OLR1P78380 273 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RELAQ04206 551 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TNP2Q05952 138 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 Q0VFX4 171 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 CDC16Q13042 620 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TRAF3Q13114 568 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ERV3-1Q14264 604 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 UGT8Q16880 541 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 DEFB109BQ30KR1 87 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 NKAIN1Q4KMZ8 207 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 VWA2Q5GFL6 755 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 THEMIS2Q5TEJ8 643 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 BROXQ5VW32 411 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TLDC1Q6P9B6 456 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TTC23LQ6PF05 361 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ATG14Q6ZNE5 492 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TIFABQ6ZNK6 161 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 LRRC70Q7Z2Q7 622 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ADCK2Q7Z695 626 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 UBE3DQ7Z6J8 389 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ASPGQ86U10 573 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 C17orf64Q86WR6 236 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 GPSM1Q86YR5 675 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RAB42Q8N4Z0 105 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 PTGR2Q8N8N7 351 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 EIF1ADQ8N9N8 165 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM52Q8NDY8 209 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 OR9A4Q8NGU2 314 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 FKBP10Q96AY3 582 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ZBTB9Q96C00 473 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SMIM10Q96HG1 83 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 EGFL8Q99944 293 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF717Q9BY31 904 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 NLNQ9BYT8 704 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 VPS11Q9H270 941 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC26A1Q9H2B4 701 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 LANCL2Q9NS86 450 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM184CQ9NVA4 438 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 WWOXQ9NZC7 414 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM216Q9P0N5 145 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 HCN3Q9P1Z3 774 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF225Q9UK10 706 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RAB21Q9UL25 225 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 PADI1Q9ULC6 663 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF490Q9ULM2 529 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RNF112Q9ULX5 631 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SRPK3Q9UPE1 567 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SPTA1P02549 2419 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 COL6A6A6NMZ7 2263 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 A0A087X1B8 175 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 A0A0G2JN53 185 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF839A8K0R7 811 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 A8MT66 165 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SGK494L7N484 410 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 OR7A17O14581 309 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 MAP2K7O14733 419 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 NDUFS4O43181 175 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ETHE1O95571 254 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 MT-ND3P03897 115 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ANXA5P08758 320 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CREB1P16220 341 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC26A3P40879 764 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CCR10P46092 362 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CD97P48960 835 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 HNRNPFP52597 415 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC12A2P55011 1212 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 POLE2P56282 527 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 RPS15AP62244 130 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 DOC2AQ14183 400 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 GRM7Q14831 915 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ZC3H12BQ5HYM0 836 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 TCTE1Q5JU00 501 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CES4AQ5XG92 561 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ATG9BQ674R7 924 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 WDR93Q6P2C0 686 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF793Q6ZN11 406 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 LANCL3Q6ZV70 420 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 RAPH1Q70E73 1250 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 FRA10AC1Q70Z53 315 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 TBC1D1Q86TI0 1168 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 SYVN1Q86TM6 617 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 TDRPQ86YL5 185 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 PRSS58Q8IYP2 241 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 GPR135Q8IZ08 494 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 OR52B6Q8NGF0 335 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 OR2Y1Q8NGV0 311 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 RHEBL1Q8TAI7 183 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 GABPB2Q8TAK5 448 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 NT5CQ8TCD5 201 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 UTP15Q8TED0 518 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 CAVIN3Q969G5 261 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 C8orf44Q96CB5 159 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 QRFPRQ96P65 431 aa6.82□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM237Q96Q45 408 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms