RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ZDHHC24Q6UX98 284 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 PLEKHG7Q6ZR37 379 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 MED25Q71SY5 747 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 LINGO2Q7L985 606 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 NLRX1Q86UT6 975 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 RHOT2Q8IXI1 618 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 C1orf52Q8N6N3 182 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 MAGEC3Q8TD91 643 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 HDAC7Q8WUI4 952 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 PYDC1Q8WXC3 89 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 HAS1Q92839 578 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 P2RX5Q93086 422 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 UBE2FQ969M7 185 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 RILPQ96NA2 401 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 NDNQ99608 321 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 MMTAG2Q9BU76 263 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 DHX33Q9H6R0 707 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ATP13A3Q9H7F0 1226 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 BARX1Q9HBU1 254 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 C7orf72A4D263 438 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 FITM1A5D6W6 292 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 METTL21EPA6NDL7 271 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 A8MXE2 369 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 H7BY64 318 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 CXCL11O14625 94 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 NRP1O14786 923 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 STX7O15400 261 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 AP5Z1O43299 807 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 SSX4O60224 188 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 CLPXO76031 633 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 OR8G3PP0DMU2 310 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ICAM3P32942 547 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 GRIA1P42261 906 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 PDX1P52945 283 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TAS2R40P59535 323 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ATP6V0D1P61421 351 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TUBB4BP68371 445 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TCHHL1Q5QJ38 904 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ZC3H14Q6PJT7 736 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 APTXQ7Z2E3 356 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TMEM17Q86X19 198 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ELMOD1Q8N336 334 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 LNX2Q8N448 690 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 KIF2BQ8N4N8 673 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 OR4A15Q8NGL6 344 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ELP5Q8TE02 316 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 CLEC4DQ8WXI8 215 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 RIT1Q92963 219 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 CXorf40BQ96DE9 158 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TIMD4Q96H15 378 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 MSLNLQ96KJ4 702 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC37BQ96QE4 947 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 RAB11FIP5Q9BXF6 653 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 TRIM9Q9C026 710 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 RNF186Q9NXI6 227 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ADAMTS6Q9UKP5 1117 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 CA5BQ9Y2D0 317 aa3.78□□□□□ -1.8
NEDD4-209ENST00000508871 ATXN2Q99700 1313 aaKnown RBP3.78□□□□□ -1.8
NEDD4-209ENST00000508871 A0A087WZ62 844 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 A0A0G2JLL6 359 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SLC9B1P1A6NJY1 282 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 F2RL2O00254 374 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ABLIM1O14639 778 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZSCAN12O43309 604 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 EDIL3O43854 480 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UTS2O95399 124 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 H6PDO95479 791 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GNAZP19086 355 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PBX2P40425 430 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TLE4Q04727 773 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TRAF2Q12933 501 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 GPM6BQ13491 265 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CPSF6Q16630 551 aaKnown RBP eCLIP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC36Q1X8D7 754 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 SPATS1Q496A3 300 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 UBAP2Q5T6F2 1119 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM92BQ6ZTR7 304 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PRRT2Q7Z6L0 340 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM219AQ8IW50 185 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 MAP7D3Q8IWC1 876 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PLD5Q8N7P1 536 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 OR13C9Q8NGT0 318 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ASB15Q8WXK1 588 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TSACCQ96A04 125 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 DCPSQ96C86 337 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 LURAP1Q96LR2 239 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FYTTD1Q96QD9 318 aaKnown RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FDXACB1Q9BRP7 624 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM39BQ9GZU3 492 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ACTR5Q9H9F9 607 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ERVK13-1Q9NX77 482 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 WDR45Q9Y484 360 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 PCDHAC2Q9Y5I4 1007 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 CDY1Q9Y6F8 540 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 A0A0A0MRY4 1105 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 FAM166BA8MTA8 275 aa3.77□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF701M0R085 212 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-209ENST00000508871 WNT7AO00755 349 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms