RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 RASGRP3Q8IV61 690 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 ZNF513Q8N8E2 541 aaPredicted RBP10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 CXorf40AQ8TE69 158 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 GLMNQ92990 594 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 TRMT61BQ9BVS5 477 aaKnown RBP10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 HDAC8Q9BY41 377 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 ACPTQ9BZG2 426 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 AASDHPPTQ9NRN7 309 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 CORO2BQ9UQ03 480 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 PRKAB1Q9Y478 270 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 UGDHO60701 494 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC16A8O95907 504 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PDYNP01213 254 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 APODP05090 189 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FABP3P05413 133 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 AGXTP21549 392 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PPIBP23284 216 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 EIF2DP41214 584 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 KIR3DL1P43629 444 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 C21orf58P58505 322 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TAS2R38P59533 333 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC35A2P78381 396 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 DPTQ07507 201 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 LRRC74AQ0VAA2 488 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 ADAM15Q13444 863 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 AQP6Q13520 282 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 LAPTM5Q13571 262 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 VEZF1Q14119 521 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 OXA1LQ15070 435 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 NPTX1Q15818 432 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 DUOXA1Q1HG43 343 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM52BQ4KMG9 183 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 AGBL4Q5VU57 503 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 DNAJC14Q6Y2X3 702 aaPredicted RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 ZNF765Q7L2R6 523 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM179BQ7Z7N9 219 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 CFAP206Q8IYR0 622 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PHACTR4Q8IZ21 702 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC22A15Q8IZD6 547 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 HS3ST5Q8IZT8 346 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PHF10Q8WUB8 498 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FCGR1BQ92637 280 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 MED8Q96G25 268 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 AKIP1Q9NQ31 210 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FAM120CQ9NX05 1096 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SELENONQ9NZV5 590 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 CORINQ9Y5Q5 1042 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 IGLON5A6NGN9 336 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 H3BM21 787 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 J3QRK9 145 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 RGS10O43665 173 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 SERPINB7O75635 380 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 INMTO95050 263 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FUCA1P04066 466 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 COL6A3P12111 3177 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 ZNF8P17098 575 aaPredicted RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 GPX2P18283 190 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PRKACGP22612 351 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TPP2P29144 1249 aaPredicted RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PTPN6P29350 595 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TIE1P35590 1138 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 OPRL1P41146 370 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 MAPK10P53779 464 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PHC1P78364 1004 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FADDQ13158 208 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 RAPSNQ13702 412 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 ATP1A4Q13733 1029 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 CST6Q15828 149 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 VMACQ2NL98 169 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PGS1Q32NB8 556 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 GTDC1Q4AE62 458 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 C2orf27AQ580R0 203 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 EIF3MQ7L2H7 374 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 PRSS48Q7RTY5 328 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 P2RY8Q86VZ1 359 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 HORMAD1Q86X24 394 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 RNF175Q8N4F7 328 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FBXL8Q96CD0 374 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 FCRL1Q96LA6 429 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 ZCCHC2Q9C0B9 1178 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 DNAJC11Q9NVH1 559 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 NDRG4Q9ULP0 352 aaKnown RBP10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM98Q9Y2Y6 226 aa10.6□□□□□ -0.71
SH3RF1-203ENST00000508685 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 KCNE1BA0A087WTH5 132 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 CLDN24A6NM45 220 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 E7EQ34 232 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 K7EQS6 105 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 NPC1O15118 1278 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 EPN2O95208 641 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 PCCBP05166 539 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 CD22P20273 847 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 TUBA1BP68363 451 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 CSTF3Q12996 717 aaKnown RBP10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 NFE2L1Q14494 772 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms