RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SNTB1Q13884 538 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 PTPRCAPQ14761 206 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 SLC47A2Q86VL8 602 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 FBXL16Q8N461 479 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 PIK3R3Q92569 461 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 LINC00615Q96LM1 132 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 B3GAT2Q9NPZ5 323 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 PIH1D3Q9NQM4 214 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 TRPV2Q9Y5S1 764 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 FAM169AQ9Y6X4 670 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 BRCA2P51587 3418 aa4.23□□□□□ -1.73
TOPBP1-206ENST00000508524 RPGRIP1LQ68CZ1 1315 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 PASKQ96RG2 1323 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 PKD1L3Q7Z443 1732 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 G3V2L1 256 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 CCL24O00175 119 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 HPRP00739 348 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 ATP5BP06576 529 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 SAGP10523 405 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 NR2F1P10589 423 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 PDHA2P29803 388 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 TRA2AQ13595 282 aaKnown RBP eCLIP4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 TOM1L2Q6ZVM7 507 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 ZFAND4Q86XD8 727 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 FAM89BQ8N5H3 189 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 TDRD5Q8NAT2 981 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 OR5T2Q8NGG2 359 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 CHPT1Q8WUD6 406 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 LGMNQ99538 433 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 ZNF510Q9Y2H8 683 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 ROCK1Q13464 1354 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 ADGRB1O14514 1584 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 USP54Q70EL1 1684 aa4.22□□□□□ -1.73
TOPBP1-206ENST00000508524 SLIT3O75094 1523 aa4.21□□□□□ -1.73
TOPBP1-206ENST00000508524 ARID2Q68CP9 1835 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 IGKV6D-41A0A0C4DH26 115 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 TRBV4-1A0A0J9YWV2 114 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 EDDM13A0A1B0GTR0 161 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 ACOD1A6NK06 481 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 TFECO14948 347 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 BCL2L11O43521 198 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 BAG3O95817 575 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 ELAVL4P26378 380 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 PCGF2P35227 344 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 IFI35P80217 286 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 LETM2Q2VYF4 491 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 FCRLAQ7L513 359 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 ABHD12Q8N2K0 398 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 RASGEF1AQ8N9B8 481 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 NOA1Q8NC60 698 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 C9orf43Q8TAL5 461 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 PARLQ9H300 379 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 THAP10Q9P2Z0 257 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 CTSZQ9UBR2 303 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 PRDM4Q9UKN5 801 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 POLR3AO14802 1390 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 N4BP2Q86UW6 1770 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 RGPD5Q99666 1765 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 HTTP42858 3142 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 LY75O60449 1722 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 PPIP5K1Q6PFW1 1433 aa4.21□□□□□ -1.74
TOPBP1-206ENST00000508524 PIK3C2AO00443 1686 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 TNRC6CQ9HCJ0 1690 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 UNC80Q8N2C7 3258 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 CNTNAP1P78357 1384 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ANKRD30BQ9BXX2 1392 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 NPIPB9F8W1W9 429 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ATP6AP2O75787 350 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 SGCGQ13326 291 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ALCAMQ13740 583 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 FAM189A2Q15884 450 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 SLC25A30Q5SVS4 291 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 Q6ZR54 194 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ZBTB49Q6ZSB9 765 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ZER1Q7Z7L7 766 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 MAML2Q8IZL2 1156 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 SLC39A11Q8N1S5 342 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 MTHFD2LQ9H903 347 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 MORF4L1Q9UBU8 362 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 RARRES3Q9UL19 164 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 CPSF1Q10570 1443 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 ACEP12821 1306 aa4.2□□□□□ -1.74
TOPBP1-206ENST00000508524 A8MXK9 166 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 K7EQD1 137 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 CLDN4O14493 209 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 SNAP91O60641 907 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 PSMD10O75832 226 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 ITIH1P19827 911 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 IL4RP24394 825 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 ALDH1B1P30837 517 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 CD300CQ08708 224 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 RASGEF1BQ0VAM2 473 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 LCLAT1Q6UWP7 414 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 DET1Q7L5Y6 550 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 KCNE4Q8WWG9 221 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms