RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 TUBA3EQ6PEY2 450 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 GFRALQ6UXV0 394 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 TMPRSS11BQ86T26 416 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 FJX1Q86VR8 437 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 CRLF3Q8IUI8 442 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 MDS2Q8NDY4 140 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 DNAJB8Q8NHS0 232 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 SUN3Q8TAQ9 357 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 M1APQ8TC57 530 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 UTP15Q8TED0 518 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 RELTQ969Z4 430 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 TBC1D20Q96BZ9 403 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF354BQ96LW1 612 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 RUNDC3BQ96NL0 473 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 SIGLEC12Q96PQ1 595 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 MCMBPQ9BTE3 642 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 TRIM31Q9BZY9 425 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC6A16Q9GZN6 736 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 PELI2Q9HAT8 420 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 KCNK13Q9HB14 408 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 MOCS1Q9NZB8 636 aa12.23□□□□□ -0.45
HMGCS1-205ENST00000508319 A0A1B0GUH1 482 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 FAM95CA0A1B0GW59 222 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 E7ESA3 106 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 CHST10O43529 356 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 WISP2O76076 250 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 UNC5CO95185 931 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 CRYABP02511 175 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 SERPIND1P05546 499 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 JAK1P23458 1154 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 ST13P50502 369 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC26A5P58743 744 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 SKP1P63208 163 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 CDKL1Q00532 357 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 PDIA2Q13087 525 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 MEP1AQ16819 746 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 ABHD13Q7L211 337 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 TBC1D19Q8N5T2 526 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 LPAR4Q99677 370 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 NAPGQ99747 312 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 HES7Q9BYE0 225 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 AICDAQ9GZX7 198 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKRD10Q9NXR5 420 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 PCDHGB6Q9Y5F9 930 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
HMGCS1-205ENST00000508319 FBN2P35556 2912 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 GABRR3A8MPY1 467 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 CCDC188H7C350 402 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 SAT1P21673 171 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 CD96P40200 585 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 OR4D2P58180 307 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 TAS2R39P59534 338 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 RAB8AP61006 207 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 GNG11P61952 73 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 OR1C1Q15619 314 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 TSNQ15631 228 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 NIPAL1Q6NVV3 410 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 QSOX2Q6ZRP7 698 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 ADAMTSL2Q86TH1 951 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 CEP97Q8IW35 865 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 LGI4Q8N135 537 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 NKAPQ8N5F7 415 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 TRPV3Q8NET8 790 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKRD49Q8WVL7 239 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 SCMH1Q96GD3 660 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 VPS39Q96JC1 886 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 AIF1LQ9BQI0 150 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 UTP23Q9BRU9 249 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 RHOJQ9H4E5 214 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 SMYD2Q9NRG4 433 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 SEC14L3Q9UDX4 400 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 DYRK1BQ9Y463 629 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 OARD1Q9Y530 152 aa12.21□□□□□ -0.45
HMGCS1-205ENST00000508319 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 IGKV3D-11A0A0A0MRZ8 115 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 TCRBV16S1A1N1A0A5B0 115 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 EFCAB8A8MWE9 144 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 B4GALT2O60909 372 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 PIAS1O75925 651 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 NEURL1O76050 574 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 WISP3O95389 354 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 SERPINA6P08185 405 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 SMIM10L1P0DMW3 83 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 MYBL2P10244 700 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 HNF4AP41235 474 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 SLC6A12P48065 614 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 HNMTP50135 292 aa12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 ACTN3Q08043 901 aaPredicted RBP12.2□□□□□ -0.46
HMGCS1-205ENST00000508319 CBLBQ13191 982 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms