RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NEK11Q8NG66 645 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 FAM71BQ8TC56 605 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 SYN2Q92777 582 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 ZMYND19Q96E35 227 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 HSPBAP1Q96EW2 488 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 TRMT61AQ96FX7 289 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 ZC3HAV1LQ96H79 300 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 C1orf159Q96HA4 380 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PTCHD1Q96NR3 888 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 OR2A5Q96R48 311 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 TRIB1Q96RU8 372 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 MACROD1Q9BQ69 325 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 MED18Q9BUE0 208 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 RAB11FIP5Q9BXF6 653 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 FSD1LQ9BXM9 530 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 SLC6A15Q9H2J7 730 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 SH2D2AQ9NP31 389 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 SEMA4BQ9NPR2 832 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 ABCF3Q9NUQ8 709 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 TUBA8Q9NY65 449 aaPredicted RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 JKAMPQ9P055 326 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 PCYOX1Q9UHG3 505 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 YARS2Q9Y2Z4 477 aaKnown RBP6.66□□□□□ -1.34
VCAN-207ENST00000507162 TESMINQ9Y4I5 508 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 KLK4Q9Y5K2 254 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 CADP27708 2225 aa6.66□□□□□ -1.34
VCAN-207ENST00000507162 LRRD1A4D1F6 860 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 ADAM11O75078 769 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 RDH16O75452 317 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 OR2J2O76002 312 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 OR6B1O95007 311 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 MATN4O95460 622 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 CRTAMO95727 393 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 CCDC172P0C7W6 258 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TMIGD3P0DMS9 266 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 PKMP14618 531 aaKnown RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 CYLC1P35663 651 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 CLCN2P51788 898 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TYRO3Q06418 890 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 FAM27E3Q08E93 113 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 NAA25Q14CX7 972 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TUSC1Q2TAM9 212 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 CCSMST1Q4G0I0 132 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 XKR6Q5GH73 641 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 RNF187Q5TA31 235 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 NSUN5P2Q63ZY6 315 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 SUSD1Q6UWL2 747 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 MEX3DQ86XN8 651 aaKnown RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 ARHGEF39Q8N4T4 335 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 OR6P1Q8NGX9 317 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 ZCCHC10Q8TBK6 192 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 SKA2Q8WVK7 121 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 RAD51AP1Q96B01 352 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 OXNAD1Q96HP4 312 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 CCDC138Q96M89 665 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 APOL2Q9BQE5 337 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 ZNF670Q9BS34 389 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 MAK16Q9BXY0 300 aaKnown RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 TMEM160Q9NX00 188 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 PSD3Q9NYI0 1048 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 IP6K2Q9UHH9 426 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TTC7AQ9ULT0 858 aaPredicted RBP6.65□□□□□ -1.34
VCAN-207ENST00000507162 CAMK2AQ9UQM7 478 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 LAMP3Q9UQV4 416 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 PCDHGB3Q9Y5G1 929 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 ATP6V1DQ9Y5K8 247 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 WIF1Q9Y5W5 379 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 EML6Q6ZMW3 1958 aa6.65□□□□□ -1.34
VCAN-207ENST00000507162 TRRAPQ9Y4A5 3859 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 A0A1W2PPV9 198 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 ZNF860A6NHJ4 632 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 SAGE2PA6NJ88 616 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 WWP2O00308 870 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 PPP1R12AO14974 1030 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 LMX1BO60663 402 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 IL18BPO95998 194 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 P04436 131 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 RFPL3SP0C7P2 107 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 OR56A5P0C7T3 313 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 FERP16591 822 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 CRYGSP22914 178 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 CCR7P32248 378 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 RPA3P35244 121 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 CPOXP36551 454 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 SOX3P41225 446 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 BDKRB1P46663 353 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 CASP9P55211 416 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 BTG2P78543 158 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 FOXF2Q12947 444 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 MPP3Q13368 585 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 SF3B4Q15427 424 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCAN-207ENST00000507162 ETFDHQ16134 617 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 PDCD2Q16342 344 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 TCP11X2Q5H9J9 407 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 VASNQ6EMK4 673 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 PLXDC2Q6UX71 529 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 PIANPQ8IYJ0 282 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms