RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CNGA4Q8IV77 575 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 VSTM4Q8IW00 320 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 SULF2Q8IWU5 870 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 KLHDC8BQ8IXV7 354 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 CLYBLQ8N0X4 340 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 ARHGEF39Q8N4T4 335 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 KCT2Q8NC54 265 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 FBXO15Q8NCQ5 510 aaPredicted RBP5.4□□□□□ -1.54
GYPB-208ENST00000507009 OR52N2Q8NGI0 321 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 LILRB4Q8NHJ6 448 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 HMGCLL1Q8TB92 370 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 OLFM1Q99784 485 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 EBNA1BP2Q99848 306 aaKnown RBP5.4□□□□□ -1.54
GYPB-208ENST00000507009 DEFB126Q9BYW3 111 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 ATG10Q9H0Y0 220 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 MMP25Q9NPA2 562 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 ALKBH4Q9NXW9 302 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 KCNN3Q9UGI6 736 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 ZNF148Q9UQR1 794 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 EFR3BQ9Y2G0 817 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 KLF13Q9Y2Y9 288 aaPredicted RBP5.4□□□□□ -1.54
GYPB-208ENST00000507009 NAALAD2Q9Y3Q0 740 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 KLK4Q9Y5K2 254 aa5.4□□□□□ -1.54
GYPB-208ENST00000507009 PRRC2AP48634 2157 aaKnown RBP5.4□□□□□ -1.55
GYPB-208ENST00000507009 INTS1Q8N201 2190 aaKnown RBP5.4□□□□□ -1.55
GYPB-208ENST00000507009 TRBV11-1A0A0K0K1C0 115 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 FAM237BA0A1B0GVD1 139 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MAGEB17A8MXT2 336 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 KLRC4-KLRK1H3BQV0 150 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MYO1CO00159 1063 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 FCHO1O14526 889 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MSTNO14793 375 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 OIP5O43482 229 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 DNAJB6O75190 326 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ZNF189O75820 626 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 MATN4O95460 622 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 FTCDO95954 541 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 HOXD4P09016 255 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 ZSCAN5DPP0CG00 497 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 IGFBP2P18065 325 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MAOAP21397 527 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 PSMA3P25788 255 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MGAT1P26572 445 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ADSLP30566 484 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 CYLC1P35663 651 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 FDFT1P37268 417 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 COILP38432 576 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 HNF4AP41235 474 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MAP2K3P46734 347 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 RPS15AP62244 130 aaKnown RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 ABATP80404 500 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 BASP1P80723 227 aaKnown RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 MEF2AQ02078 507 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 RHAGQ02094 409 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ACVR1Q04771 509 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 TFF3Q07654 80 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 CMPK2Q5EBM0 449 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 PCID2Q5JVF3 399 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 TMEM214Q6NUQ4 689 aaKnown RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 C16orf47Q6ZP98 133 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 PEX26Q7Z412 305 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 MDGA2Q7Z553 956 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 VN1R4Q7Z5H5 301 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ASPGQ86U10 573 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 SLC26A11Q86WA9 606 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 LRRC6Q86X45 466 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 PDSS2Q86YH6 399 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 REXO1L1PQ8IX06 675 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 CYP4Z2PQ8N1L4 340 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 TMEM156Q8N614 296 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 UBL4BQ8N7F7 174 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 CAMKVQ8NCB2 501 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 RNF214Q8ND24 703 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ACRBPQ8NEB7 543 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 GOT1L1Q8NHS2 421 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 ZNF480Q8WV37 535 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 C1orf54Q8WWF1 131 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 RMND5BQ96G75 393 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 PTCHD1Q96NR3 888 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 SLC30A3Q99726 388 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 FOXC2Q99958 501 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 TREX2Q9BQ50 279 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 TP63Q9H3D4 680 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 LIN28AQ9H9Z2 209 aaKnown RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
GYPB-208ENST00000507009 PNPLA3Q9NST1 481 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 KCMF1Q9P0J7 381 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ST6GALNAC2Q9UJ37 374 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 FBXW2Q9UKT8 454 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 AMFRQ9UKV5 643 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ERVK-11Q9UQG0 969 aa5.39□□□□□ -1.55
GYPB-208ENST00000507009 ANKHD1Q8IWZ3 2542 aaKnown RBP5.38□□□□□ -1.55
GYPB-208ENST00000507009 GRID2IPA4D2P6 1211 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 ERI2A8K979 691 aaKnown RBP5.38□□□□□ -1.55
GYPB-208ENST00000507009 E7ENX8 843 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 PFDN6O15212 129 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 NDUFS4O43181 175 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 CHST10O43529 356 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 KLK8O60259 260 aa5.38□□□□□ -1.55
GYPB-208ENST00000507009 LCMT2O60294 686 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms