RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 EEF2KO00418 725 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FCHO1O14526 889 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 LY6HO94772 140 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TJP3O95049 919 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TSPAN15O95858 294 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FTCDO95954 541 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SLC4A1P02730 911 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 HLA-DQB2P05538 268 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RBMY1DP0C7P1 496 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CCL3P10147 92 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 PEPDP12955 493 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 APEHP13798 732 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SNRPBP14678 240 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 PTMSP20962 102 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CNR1P21554 472 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 PSMB5P28074 263 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 HMGCLP35914 325 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SOX3P41225 446 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 NR4A2P43354 598 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TRPC1P48995 793 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 AIF1P55008 147 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 GSCP56915 257 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SNX16P57768 344 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 OGDHQ02218 1023 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF844Q08AG5 666 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 DUSP8Q13202 625 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 KLF1Q13351 362 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 MAMLD1Q13495 774 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ABRAXAS2Q15018 415 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZSWIM7Q19AV6 140 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 LONRF2Q1L5Z9 754 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF750Q32MQ0 723 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF672Q499Z4 452 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 MINDY4Q4G0A6 757 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 NHSL2Q5HYW2 709 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RNF187Q5TA31 235 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF658Q5TYW1 1059 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 MARC1Q5VT66 337 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RUSC1-AS1Q66K80 236 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ANKRD34AQ69YU3 496 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ASPHD2Q6ICH7 369 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 KLHL10Q6JEL2 608 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 DPY19L2P1Q6NXN4 242 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 VWA1Q6PCB0 445 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 LYPD8Q6UX82 237 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RINLQ6ZS11 566 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SYDE1Q6ZW31 735 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 MICALCLQ6ZW33 695 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 REC114Q7Z4M0 266 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CCDC116Q8IYX3 515 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 GCNT2Q8N0V5 402 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FMR1NBQ8N0W7 255 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RASGEF1CQ8N431 466 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SVOPLQ8N434 492 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TMEM156Q8N614 296 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TMEM35BQ8NCS4 154 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 OR51Q1Q8NH59 317 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 OR5K2Q8NHB8 316 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 GDAP1Q8TB36 358 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZCCHC10Q8TBK6 192 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FAM71BQ8TC56 605 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF418Q8TF45 676 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 WFDC12Q8WWY7 111 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZUFSPQ96AP4 578 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TADA1Q96BN2 335 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 INTS12Q96CB8 462 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF653Q96CK0 615 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 FAF2Q96CS3 445 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CABS1Q96KC9 395 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 C1orf147Q96MC9 270 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TIGD1Q96MW7 591 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TTC25Q96NG3 672 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZFP3Q96NJ6 502 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 IL17FQ96PD4 163 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 UCN2Q96RP3 112 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CITED1Q99966 193 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RBM4BQ9BQ04 359 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 YIPF2Q9BWQ6 316 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 TRIM2Q9C040 744 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 POLR1EQ9GZS1 481 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 DRC3Q9H069 523 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 NUP62CLQ9H1M0 184 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RASSF4Q9H2L5 321 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CLSTN2Q9H4D0 955 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 NLRC4Q9NPP4 1024 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RTN4Q9NQC3 1192 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 RAD18Q9NS91 495 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CWC15Q9P013 229 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ARMCX3Q9UH62 379 aaPredicted RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 IKZF3Q9UKT9 509 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 CDC14AQ9UNH5 594 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 PPIEQ9UNP9 301 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 ZDHHC9Q9Y397 364 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 DUSP10Q9Y6W6 482 aa3.03□□□□□ -1.92
TCOF1-208ENST00000506063 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.03□□□□□ -1.92
TCOF1-208ENST00000506063 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 IGKV3D-11A0A0A0MRZ8 115 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 IGKV1-8A0A0C4DH67 115 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 A0A1W2PP18 115 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms